| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6024 |
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| Symbol | |
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| ID | 6181841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 580980 |
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| End bp | 582218 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641689154 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001816013 |
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| Protein GI | 172065301 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTTC GTGCGAGCCG ACTGCTGCTT GCCCTGACGA CTGCCGCGGC GTTCGCCGCG
GGGACGGCCG ACGCGGGCAC GCTGAAGGTG AACGTCGCCG CGCGCGGCAA CCAGCGCGCG
ACGTGGCAAG CGGTGTTCGA CCAGTTCCAC AAGGCGAATC CGGACATCGA CCTGAAGGTC
AGCTACGTCG GCGAGGAGGC GTACAAGGTG CAGATGTCCG GCTGGCTCGC GACCGATCCG
CCCGACGTGC TGAGCTGGAA CAACGGCGAG CGGCTCGCGT ATTTCGCGAA GCGCGGGCTG
ATCGAGGACC TGAGCGCGGA CTGGCAGAAG AACGGCTGGA CCGACACGTA TGCGGCCGTG
AAGCAGTCGT CGACCTACGG CGGCAAGCTC TACAGTTTGC CGCTCGGCTA TGACGCGTAT
GGTCTCTTCT ACCGCAAGGA CCTGTTCGAG AAGGCGGGCA TTCACGGCGA GCCGGCGGAC
TGGACGCAGT TTCTCGACGC GTGCCGCAAG CTGAAGGCGG CCGGCATCGC GCCGATCGCG
GTGGCCGCGC GCGACGCGTG GACGCTCGCC GCGTGGTTCG ACTACCTCGA CCTTCGGATC
AACGGTTATG CATTCCACCA GAAGCTGATG GCCGGCGACG TCGGCTATAC CGACCCGCGC
GTGCGGGCCG TGTACGCGGC CTGGAAGAAG TTGATCGACG ACAAGTATTT CATCGACAAC
GCGCTGTCCT ACGACGTCGA TTCGCTGAGC CCGCTGATCG TCAACGGCCA GGCCGCGATG
ACGCTGATGG GCACCTGGTA TTCGGCGGGC CTGCTGAGCG CGACGCGCAA CCCGATCAGC
TTCTTCCGCT TCCCGGTGAT CGACGCGTCG GTGCCGCTCG CGGAGGACGG TCCGGTCAAC
GTGCTGATCG TGCCGGCGAA GGCGCACAAC AAGACGGATG CGCGTCGCCT GCTCGCGTTC
ATGGGGCAAC CGGCGGTCAG CGGCGAGTTC GCGAAGGGGA TGGGCCAGCT GCCATCGAAC
AACAAGGCGC CCGAGCCGCA GGACCCGATC TCGAAGATCG GCTTCCGCAC GCTCGCGACG
ACGCCCGGCG GCATCGCGCA GTTCTACGAC CGCGACATGA CGAAGGAAAT GGCGGACGAG
GGGATGAAGG CGATGCAGCA GTTCCTGTCC GACCCGACGC AGCTCGATGC GATCCTGCAG
CGCCTCGAGC AGACCCGCAA GCGCATCTAC CGGAAGTGA
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| Protein sequence | MRLRASRLLL ALTTAAAFAA GTADAGTLKV NVAARGNQRA TWQAVFDQFH KANPDIDLKV
SYVGEEAYKV QMSGWLATDP PDVLSWNNGE RLAYFAKRGL IEDLSADWQK NGWTDTYAAV
KQSSTYGGKL YSLPLGYDAY GLFYRKDLFE KAGIHGEPAD WTQFLDACRK LKAAGIAPIA
VAARDAWTLA AWFDYLDLRI NGYAFHQKLM AGDVGYTDPR VRAVYAAWKK LIDDKYFIDN
ALSYDVDSLS PLIVNGQAAM TLMGTWYSAG LLSATRNPIS FFRFPVIDAS VPLAEDGPVN
VLIVPAKAHN KTDARRLLAF MGQPAVSGEF AKGMGQLPSN NKAPEPQDPI SKIGFRTLAT
TPGGIAQFYD RDMTKEMADE GMKAMQQFLS DPTQLDAILQ RLEQTRKRIY RK
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