| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6009 |
|---|
| Symbol | |
|---|
| ID | 6181894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 565432 |
|---|
| End bp | 566391 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641689139 |
|---|
| Product | protein involved in MetA-pathway of phenol degradation-like protein |
|---|
| Protein accession | YP_001815998 |
|---|
| Protein GI | 172065286 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4313] Protein involved in meta-pathway of phenol degradation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAT GCGGCTCTCG CCTGCTTGCG ATCGCAGGCC TCGTGTTCGC CGGCCTGACC
GGACCCGCGC CGGCCCATGC GACCGACCTG CCGGCGGTCA ACCTCGGGAT GACCAGCTTT
CTCGACGGGA TGCCGCCGGC CGGCTCCGGC TGGTACGGCA CGCAGTATCT CGAGTACTAC
ACGGCCGGCC GCATCAACGA CAATGCCGGC AACAAGGTCG GGCTGCCGAA GCAGGACATC
GACCTGTTCG CGGGATTGAG CCAGCTCGTC TACCAGTCGC CGCTGACGTT CGGCGGCATG
CATCCGGGGC TCGACGTGAT CCTGCCATGG GTGGCGTCCG TGCATACCAA CGACGGGATC
GGCAACGTCG CGCTGAATTC CCGTGCCGGG TTCGGCGACC TGCTGGTCGG CCCGTTCATC
CAGTTCGATC CGGTGATGGG GGCGCACGGC CCGCGCTTCG CGCAGCGCGT GGAATTCCAG
TTCATCGCGC CGACCGGCGC ATACGATCCG GCGCGTGCGA TCAATCCGGG CAGCCATTTC
TGGTCGTTCG ATCCGTACTG GGCCGCGACG TTCTGGGTCA CGCCGAAGTG GACCGTGTCA
TGGCGGCTGC ACTATTTGTG GAATGCGACC AATCACGAGC CGGCGGCCGC GCTCGGGCCT
GACGTGACGT CGACGCGTGC CGGTCAGGCC GTTCATGCGA ACTTCGCGAC GGAGTACGAA
GTGCGGCCGG GGCTGCGGCT GGGGCTCAAC GGCTATTGGC TGCGCCAGAC CACCGACATG
AAGGCGAACG GTCAGGATGT TGCCGGCACG CGGGAAGCCG TGCTGGCGAT CGGGCCGGGC
GCGATGGTCA GCTTCTCGCC GCAGGATCAC CTGATGTTCA ACGCGTATTT CGAGGTCTAC
GCGCGCAACC GGCCGCAGGG CACGCGGATG GTGTTGCGGT ACGTGCATCA TTTTCATTAG
|
|---|
| Protein sequence | MMKCGSRLLA IAGLVFAGLT GPAPAHATDL PAVNLGMTSF LDGMPPAGSG WYGTQYLEYY
TAGRINDNAG NKVGLPKQDI DLFAGLSQLV YQSPLTFGGM HPGLDVILPW VASVHTNDGI
GNVALNSRAG FGDLLVGPFI QFDPVMGAHG PRFAQRVEFQ FIAPTGAYDP ARAINPGSHF
WSFDPYWAAT FWVTPKWTVS WRLHYLWNAT NHEPAAALGP DVTSTRAGQA VHANFATEYE
VRPGLRLGLN GYWLRQTTDM KANGQDVAGT REAVLAIGPG AMVSFSPQDH LMFNAYFEVY
ARNRPQGTRM VLRYVHHFH
|
|---|
| |