Gene BamMC406_5998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5998 
Symbol 
ID6181883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp552272 
End bp553543 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content68% 
IMG OID641689128 
Producthypothetical protein 
Protein accessionYP_001815987 
Protein GI172065275 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.449591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGCG CAGCTCGTCA TCCGAAGCTC ACGCGTCGCG GTCTGCATCG TCAGCAAGGC 
GCCGTCGCGA TCATCGTCGG TCTCGCACTG GCGGTGATGA TCGGGTTCGT CGGTCTCGCG
CTGGACCTCG GCAAGCTGTA CGTCACGCGC AGCGAACTGC AGAACAGCGC CGATGCCTGC
GCGCTGTCCG CTGCGCGCGA CCTTACGTCG GCCATCAGCC TGCAGGTCGC GGAAGCCGAC
GGCATCGCCG CCGGCCACGC GAATTTCGCG TTCTTCCAGC AGAACGCGGT GCAGATGCAG
ACGGATTCGA ACGTCACGTT CAGCGATTCG CTGACCAATC CGTTCCTGAC CAAGACGGCG
GTCGCCACAC CGGCGAACGT CAAGTACGTG AAGTGCACCG CGCAGTTGAG CAACATCGCG
CACTGGTTCA TCGAGGTGCT CAACACGATT CCCGGCCTGC AGGTCGCGAA CGCGGCGCAG
GTCGCAGCCA GCGCGATCGC CACGGTCGGG GCCGGGCAGA CCACCTGCGC GATTCCGGTG
TTCGTCTGCA AGCCGGCGTC CTCCGCGCCG TACAAGGTCG GCGACTGGAT CTCGTCGCCG
TCCGGCTCGT CGACGACGTA CGGGCCCGGC AACTTCGGCT GGGCGGCGCT CGATGGCTCG
ACGAACGAGC CGACCATCGC CAGCGAACTG TCCGGCAACA CCTGCAACAT CACGTCGCCG
CCGGACCTCG GCTCGACGGG CCTGAAGTCC GCGTCGCTGC GTGCCTGGAA CACCCGCTTC
GGCATCTACA CGAACGGCGC CAACGGCTCG AGCGGCCAGC CTGACTTCAC CGGCTATGCG
TATGTCGGCC CGAAATACGG GCCGCCGGGA ACCGCGGGCA TCGTCGGCGA CGCGTACACG
CAGTTCGTGC TCGATCGCGC GAGCTTCAAG GCCTACCAGG GCGACGGCAC GCCGCCCACC
GGCAGCGGCA TCTCGACCAA CGGGACCGTC ACGGCCAGCA ACTACCAGAC GTATGGCGGC
GACCGCCGGG TCGCGCTGGC TCCCGAAGGC GACTGCTCGA CGCTGTCGGG CAGCAGCGGC
AAGGTGCACG TCACGCAATG GGACTGCGTG CTGATGCTCG ATCCGCTGCC GTTCAGCCCG
GGAGCCGGCG GGGTCGTGGC GCACCTCGAA TACCTCGGCT CCACGGCCTC CGGCACCACG
CCGTGCGCGA CGCACGGCCT GCCGGGCAGC GGCAGCTCGG TCGGTATCAA GGTACCGATG
CTCGTTCAAT AG
 
Protein sequence
MSSAARHPKL TRRGLHRQQG AVAIIVGLAL AVMIGFVGLA LDLGKLYVTR SELQNSADAC 
ALSAARDLTS AISLQVAEAD GIAAGHANFA FFQQNAVQMQ TDSNVTFSDS LTNPFLTKTA
VATPANVKYV KCTAQLSNIA HWFIEVLNTI PGLQVANAAQ VAASAIATVG AGQTTCAIPV
FVCKPASSAP YKVGDWISSP SGSSTTYGPG NFGWAALDGS TNEPTIASEL SGNTCNITSP
PDLGSTGLKS ASLRAWNTRF GIYTNGANGS SGQPDFTGYA YVGPKYGPPG TAGIVGDAYT
QFVLDRASFK AYQGDGTPPT GSGISTNGTV TASNYQTYGG DRRVALAPEG DCSTLSGSSG
KVHVTQWDCV LMLDPLPFSP GAGGVVAHLE YLGSTASGTT PCATHGLPGS GSSVGIKVPM
LVQ