Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5998 |
Symbol | |
ID | 6181883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 552272 |
End bp | 553543 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641689128 |
Product | hypothetical protein |
Protein accession | YP_001815987 |
Protein GI | 172065275 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.449591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCG CAGCTCGTCA TCCGAAGCTC ACGCGTCGCG GTCTGCATCG TCAGCAAGGC GCCGTCGCGA TCATCGTCGG TCTCGCACTG GCGGTGATGA TCGGGTTCGT CGGTCTCGCG CTGGACCTCG GCAAGCTGTA CGTCACGCGC AGCGAACTGC AGAACAGCGC CGATGCCTGC GCGCTGTCCG CTGCGCGCGA CCTTACGTCG GCCATCAGCC TGCAGGTCGC GGAAGCCGAC GGCATCGCCG CCGGCCACGC GAATTTCGCG TTCTTCCAGC AGAACGCGGT GCAGATGCAG ACGGATTCGA ACGTCACGTT CAGCGATTCG CTGACCAATC CGTTCCTGAC CAAGACGGCG GTCGCCACAC CGGCGAACGT CAAGTACGTG AAGTGCACCG CGCAGTTGAG CAACATCGCG CACTGGTTCA TCGAGGTGCT CAACACGATT CCCGGCCTGC AGGTCGCGAA CGCGGCGCAG GTCGCAGCCA GCGCGATCGC CACGGTCGGG GCCGGGCAGA CCACCTGCGC GATTCCGGTG TTCGTCTGCA AGCCGGCGTC CTCCGCGCCG TACAAGGTCG GCGACTGGAT CTCGTCGCCG TCCGGCTCGT CGACGACGTA CGGGCCCGGC AACTTCGGCT GGGCGGCGCT CGATGGCTCG ACGAACGAGC CGACCATCGC CAGCGAACTG TCCGGCAACA CCTGCAACAT CACGTCGCCG CCGGACCTCG GCTCGACGGG CCTGAAGTCC GCGTCGCTGC GTGCCTGGAA CACCCGCTTC GGCATCTACA CGAACGGCGC CAACGGCTCG AGCGGCCAGC CTGACTTCAC CGGCTATGCG TATGTCGGCC CGAAATACGG GCCGCCGGGA ACCGCGGGCA TCGTCGGCGA CGCGTACACG CAGTTCGTGC TCGATCGCGC GAGCTTCAAG GCCTACCAGG GCGACGGCAC GCCGCCCACC GGCAGCGGCA TCTCGACCAA CGGGACCGTC ACGGCCAGCA ACTACCAGAC GTATGGCGGC GACCGCCGGG TCGCGCTGGC TCCCGAAGGC GACTGCTCGA CGCTGTCGGG CAGCAGCGGC AAGGTGCACG TCACGCAATG GGACTGCGTG CTGATGCTCG ATCCGCTGCC GTTCAGCCCG GGAGCCGGCG GGGTCGTGGC GCACCTCGAA TACCTCGGCT CCACGGCCTC CGGCACCACG CCGTGCGCGA CGCACGGCCT GCCGGGCAGC GGCAGCTCGG TCGGTATCAA GGTACCGATG CTCGTTCAAT AG
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Protein sequence | MSSAARHPKL TRRGLHRQQG AVAIIVGLAL AVMIGFVGLA LDLGKLYVTR SELQNSADAC ALSAARDLTS AISLQVAEAD GIAAGHANFA FFQQNAVQMQ TDSNVTFSDS LTNPFLTKTA VATPANVKYV KCTAQLSNIA HWFIEVLNTI PGLQVANAAQ VAASAIATVG AGQTTCAIPV FVCKPASSAP YKVGDWISSP SGSSTTYGPG NFGWAALDGS TNEPTIASEL SGNTCNITSP PDLGSTGLKS ASLRAWNTRF GIYTNGANGS SGQPDFTGYA YVGPKYGPPG TAGIVGDAYT QFVLDRASFK AYQGDGTPPT GSGISTNGTV TASNYQTYGG DRRVALAPEG DCSTLSGSSG KVHVTQWDCV LMLDPLPFSP GAGGVVAHLE YLGSTASGTT PCATHGLPGS GSSVGIKVPM LVQ
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