Gene BamMC406_5938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5938 
Symbol 
ID6182185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp484939 
End bp485550 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content69% 
IMG OID641689069 
Productheme/copper-type cytochrome/quinol oxidase subunit 3-like protein 
Protein accessionYP_001815928 
Protein GI172065216 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC TGCCGCGCCC CTTCGGTCCC GACGCGCAAC CGGTCTTGCC GAATGCGGGC 
CGCACGGGCC TGATCGTCTT CATGGCGGTG GCCACGACGT TGTTTTCGCT GCTGCTGCTC
GCCTATGGGA TGCGCATGCG CGAGCCCGAC TGGCAACCGA TTCCGCATCC GGCGCTGCTG
TGGTGGAACA CCGGTGCGCT GGTGCTGGCC AGCATCGCGA TGCAGCGCGC CCGGCGGATG
ACCTTGCACC GCGCGGTGTG GCTGGTATCC GGCGGCGTGC TGGCGGCGTT GTTCGTGATC
GGGCAACTGA CTGCGTGGCG CATGCTGTCC GCCGCCGGGC AGACCGTCAA CGTCAATCCT
TCCAACAGCT TCCTGTACCT GCTCACCGGC CTGCACGGGC TGCATGTGCT GGGCGGGCTG
GTGGCCTGGG TCGTCACGAT CGCGCTTGTG CGGCGCGCGG ACCCGTTCCG GGCCCAGCGC
GCCATTGCGC TGTGCGCGAC CTACTGGCAT TTCCTGCTGG CTGTCTGGCT CGTGCTGCTG
GCGGCGATGT GGTGGATGAC CCCCGCGATC GTCGCCGCCA TCTGCGGGCC GCTGTATGGA
GCCGCGCCAT GA
 
Protein sequence
MTTLPRPFGP DAQPVLPNAG RTGLIVFMAV ATTLFSLLLL AYGMRMREPD WQPIPHPALL 
WWNTGALVLA SIAMQRARRM TLHRAVWLVS GGVLAALFVI GQLTAWRMLS AAGQTVNVNP
SNSFLYLLTG LHGLHVLGGL VAWVVTIALV RRADPFRAQR AIALCATYWH FLLAVWLVLL
AAMWWMTPAI VAAICGPLYG AAP