| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5929 |
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| Symbol | |
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| ID | 6182176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 472239 |
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| End bp | 473072 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641689060 |
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| Product | two component AraC family transcriptional regulator |
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| Protein accession | YP_001815919 |
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| Protein GI | 172065207 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.473719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCCC GCTCGTCCAG TCCGGCGTCG CTGCGCGCCA CGCCGGATCT CGTTGGCGCA
CACATTCTTG TCGTAGACGA CCGACCTAAC GACCTGCGGC TACTGACGGA GATCCTGCGT
TCGGCGCGAT GCCGGATCAG TGTCGCGTTC GACGGGCTGC AGGCCTATCA CCGCGCGCAA
GCCGTCGCGC CCGACCTGAT CCTGATGGAT GTCCGGATGC CGCGCATGGA CGGCTTCGCC
GCGTGCCGCC TGCTGGCATC GACGCCGTCG ACGCAGAACA TACCCGTCAT CATCCTGACC
GCCGCTGCCG ATCTCGACGA TCGCATCGCG GGGCTCGAAA CCGGTGCGCT CGACTACATC
GTGAAGCCGT TCGAACCGGT CGAGGTCATT GCGCGGATCC GCAATCATCT GAAGCGCGCG
CGGCGCAGCC AGCCGTTCGC GCACCTGCCC GATCTGCCCG ACCATCCGGA CGCCGCGCTG
GTGCGCGCGG CGAGCGACGT GCTGCTGCGC GAATTGCGCA ATCCGCCGAC GCTCGAGGAA
CTCGCGCGGC AAGTCGGCAC GCACGAAAAG CGGCTGTCGC GCGTGTTTCG CGATCATCTC
GGCCAGACCG TGTTCGAATA CCTGCGCGAC ACACGGCTGC GCGCCGCGAA GCACTTTCTC
GCGGAGACGT CGATGGGGAT CGGCGACATC GCCGAGGAAA TCGGCTTCTC GACGCCGGGC
AATTTCGCGA CGGCGTTTCG CGAACGGTTC GGCATCACGC CGTCCGACTG GCGGCGCCAG
CGTCCGGCGG TCGACGCACT GCCCGCGACG CATGATCAGC CGCGCGATGC CTAG
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| Protein sequence | MSSRSSSPAS LRATPDLVGA HILVVDDRPN DLRLLTEILR SARCRISVAF DGLQAYHRAQ
AVAPDLILMD VRMPRMDGFA ACRLLASTPS TQNIPVIILT AAADLDDRIA GLETGALDYI
VKPFEPVEVI ARIRNHLKRA RRSQPFAHLP DLPDHPDAAL VRAASDVLLR ELRNPPTLEE
LARQVGTHEK RLSRVFRDHL GQTVFEYLRD TRLRAAKHFL AETSMGIGDI AEEIGFSTPG
NFATAFRERF GITPSDWRRQ RPAVDALPAT HDQPRDA
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