Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5888 |
Symbol | |
ID | 6182471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 422428 |
End bp | 423252 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641689019 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001815878 |
Protein GI | 172065166 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.653505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACTC GAATCGTTCA CGGCAACACG CTGCATTACC AGGATCACGG CACCGGCTTT CCGGTGCTGC TGGGGCACAG CTATCTGTGG GACGCGGCGA TGTGGGCGCC GCAGATCGAC GCGTTGTCCA GCCGCTATCG CGTGATCGTG CCGGACCTGT GGGGGCATGG CGCGTCGGGT CCGCTGCCCG CCGGAACGCA GACGCTCGAC GATCTCGCCG CACACGCGAG CACATTGCTC GATGCGCTGG AGATCGAGCA ATGCGCGGTC GTCGGCCTCA GCGTCGGCGG GATGTGGGGC GCGAGGCTCG CGTTGCGCGA ACCGCGGCGC GTGCGCTCGC TCGTGCTGAT GGATGCGTCG CTCGAGGCCG AGCCCGACGC GACGCGCCTG CGCTACTTCG CGATGCTCGA TGCGATCGAG GCCGCCGGCA GCGTCGTGCC GCCGCTGCTC GACGCGATCG TGCCGCTGTT CTTCCGGCCA GACGTGAACC TCGCCGACCC GGTGCCGAGC GCGTTTCGCG CGGCGCTCGC GAAGCTGCCG GCCGACCGGC TGCGGGAATC GATCGGCCCG CTCGGCCGGC TGATCTTCGG GCGACCGGAT ACGCTGGCCG CGCTTGCCGA CCTGGACGGC GAACGCACGC TGCTGATGTG CGGCGCGGGC GACATGGCGC GCCCGCCGTC CGAGACGGTG AAGATGGCGA GCGTGATCGG CTGCCGCCAC GCGCTGGTGC CGGACGCCGG CCATATCTCG AACCTGGAGA ATCCCGCGTT CGTCACGCGG ATGCTGCTCG ACTGGTTCGA CGAACAGCTG CTCGCGGCGG GCTGA
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Protein sequence | MPTRIVHGNT LHYQDHGTGF PVLLGHSYLW DAAMWAPQID ALSSRYRVIV PDLWGHGASG PLPAGTQTLD DLAAHASTLL DALEIEQCAV VGLSVGGMWG ARLALREPRR VRSLVLMDAS LEAEPDATRL RYFAMLDAIE AAGSVVPPLL DAIVPLFFRP DVNLADPVPS AFRAALAKLP ADRLRESIGP LGRLIFGRPD TLAALADLDG ERTLLMCGAG DMARPPSETV KMASVIGCRH ALVPDAGHIS NLENPAFVTR MLLDWFDEQL LAAG
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