Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5874 |
Symbol | |
ID | 6182772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 405940 |
End bp | 406977 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641689005 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001815864 |
Protein GI | 172065152 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATCCA GTAGCGAGAA GCTGTCCGGC AGCATCAGCG TGTTCGCCGC CGTGGTGGAC ATGGGGACGT TCGCGGCCGC ATCGGAAGTC ATAGGAATGA CACCACCGGG CGTTAGTCGC GCAATCGCGC GACTGGAAAA AAAGCTCAAC ATCCGGCTCT TCAACCGAAC GACACGCTCC GTCTCGCTCA CTGAAGAGGG CCGCCGCTTT TACGAGCAGG TCATGCCCCA TCTCGCCGGG CTGGAGGAAG CAGCCGCGGC TGCGGCAGGT AGCGCCTCCG CTGTGCGTGG AAAGCTGAGA GTCAATCTTG ATCCTGTCGT CTACCGGACC ATTCTTGGGC CGCAACTCGA TTCGTTCATG GACGCGCACC CGGAACTCGA AATCGAGCTC ATCGCACGAG ACAGTCTTGG CGACCTCGTC ATGGATGGCT TCGACATCGC CGTGCGATTC GGCGAGCCCC GAGCCTCTAC GCTGATCGCG AGAAAGTTGC TCGATACCGG CATTGTTACG GTCGCATCGC CCGCGTATAT CGCTCGCTGG GGACGGCCGA CAAAACCCGA GGACCTGGAA AGCCGAAGCC ATCGATGCAT TGAATTTCGC AACCCGGAGA CCGGCAAGCC GTTCGCGTGG GAATTCCATC GCCGGCGAAA GCGCATTGTG GTCGACACCC GGGGACGCCT CACGGTCAAC GATCCGGGTG CCCTGCTCAA CGCATGCCTC GCCGGTTCCG GAATTGCGCA GATGTTGCTG CTCGGTGCCG AGCCCCTGAT CGCGAACGGC CAATTGATCA ATCTGTTTCC CGAATGGGCA GACGAGCGAT TTCCGTTATA CGCGTACTAC CCGTCCCGGC ATCACCTGCC GGCAAAGACG CGGGCGTTTC TTGACTTCGT GGTTGAGCTG ATGGCAACCA TGAGCGCGTC GGCACGCGCC AAGCACCCGC GATCTCGCCA TCAGTCGCAT CTCAAAGCAG CAGCGAGACA CATAGCGCCA TACCGGTCAG GTAGGTGCCC AGTGCGCCGA CGAACCGCAA AGGGTTGA
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Protein sequence | MRSSSEKLSG SISVFAAVVD MGTFAAASEV IGMTPPGVSR AIARLEKKLN IRLFNRTTRS VSLTEEGRRF YEQVMPHLAG LEEAAAAAAG SASAVRGKLR VNLDPVVYRT ILGPQLDSFM DAHPELEIEL IARDSLGDLV MDGFDIAVRF GEPRASTLIA RKLLDTGIVT VASPAYIARW GRPTKPEDLE SRSHRCIEFR NPETGKPFAW EFHRRRKRIV VDTRGRLTVN DPGALLNACL AGSGIAQMLL LGAEPLIANG QLINLFPEWA DERFPLYAYY PSRHHLPAKT RAFLDFVVEL MATMSASARA KHPRSRHQSH LKAAARHIAP YRSGRCPVRR RTAKG
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