Gene BamMC406_5871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5871 
Symbol 
ID6182770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp403995 
End bp405125 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content62% 
IMG OID641689003 
Productalpha/beta hydrolase fold 
Protein accessionYP_001815862 
Protein GI172065150 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCACG GGGTCAACGG CCTCGATGTC CATATTCTCG AGGCCGGTTA CGAGAACCCC 
GGCCGGCCGC TCGCACTGCT TCTGCACGGT TTTCCCGACT TGGCTTACGG ATGGCGACAC
CTGATCCCGA TTCTCGCCGA CGCCGGCTAC CACGTCGTGG CGCCCGACCA GCGGGGTGTT
GGCCGCACCA CCGGTTGGCT GAACGACTAT GACGCACCGC TGGCACCTTT CAGCCTTTTG
AATATGACGC GTGACGCTCT CGGATTGGTT TTGGCGTTGG GGTATCGGCG TACGGCAATG
CTCGTCGGGC ACGACCTCGG CTCGCCCGTC GCGGCCTATT GTGCGCTAGC CCGACCTGAC
GTCTTTCCCT CGGTGGTGCT GATGAGCGCA CCGTTCCCCG GTCCGCCGAC GCTTCCGTTC
AACATTGCGG AAAGCGAGAT ATCGTCGGTT CAACCGAACA CTGGCAATCA AAAGTTGGCG
GCCGCGCTGG CGGCGCTCGA CCCGCCGAGA AAGTATTACC AGCAATACCT GAGCACACGT
GAGGCGAACC ATGACATGTG GCAACCTCCA CAAGGCTTAC ACGCGTTTCT TCGTGCATTT
TTCTATGTCA AGAGCGCCGA CTGGCCGGGC AACAAGCCGC ATCCGTTGAA GGCGCCAACC
GCCGCCGAAC TTGCGCAAAT GCCCACCTAT TACGTCATGG AACTCGGCAA GACGATGCCC
GAGACCGTCG CTCCATTCCA ACCTTCCTCC GCCGAGGTCC TGGCCGGCGA ATGGCTCACC
GAGCCGGAAC TTGGGGTGTA CACGGAAGAG TACGGCCGCA CGGGGTTTCA AGGCGCCCTG
CAGGCTTATC GTGTCCTTTC CGATCCTGGC CTGAACGCCG AGTTGCGCCT GTTTTCGGGC
AAGACGATCG ATGTCCCGTC GCTCTTCATT GGCGGCAAGA GCGATTGGGG CACGTATTCG
GCGCCGGGCG CGCTCGACCT GATGAGGACG AAGGCGACGA CGAGAATGGC GGGAATCGAG
CTGATCGACG GCGCTGGTCA CTGGATCCAA CAGGAGCAGC CGGGTCGGCT CGGCGAACTC
CTGCTCGCCT TCGCCAAGGA GGCGGGTGGG GCGGATCACA CTCGCAGTTA A
 
Protein sequence
MIHGVNGLDV HILEAGYENP GRPLALLLHG FPDLAYGWRH LIPILADAGY HVVAPDQRGV 
GRTTGWLNDY DAPLAPFSLL NMTRDALGLV LALGYRRTAM LVGHDLGSPV AAYCALARPD
VFPSVVLMSA PFPGPPTLPF NIAESEISSV QPNTGNQKLA AALAALDPPR KYYQQYLSTR
EANHDMWQPP QGLHAFLRAF FYVKSADWPG NKPHPLKAPT AAELAQMPTY YVMELGKTMP
ETVAPFQPSS AEVLAGEWLT EPELGVYTEE YGRTGFQGAL QAYRVLSDPG LNAELRLFSG
KTIDVPSLFI GGKSDWGTYS APGALDLMRT KATTRMAGIE LIDGAGHWIQ QEQPGRLGEL
LLAFAKEAGG ADHTRS