Gene BamMC406_5842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5842 
Symbol 
ID6182652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp373784 
End bp374509 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content66% 
IMG OID641688977 
Productpirin domain-containing protein 
Protein accessionYP_001815836 
Protein GI172065124 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA CTCGTGCAGC AAACCAACGT GGCCATGCCG AACACGGCTG GCTCAGCTCC 
CGTCACACGT TTTCGTTCGC GAACTACTAC GATCCGAAGC AAGTCGGCTT CTCCGACCTG
CTGGTGATCA ACGACGACCG CGTCGCACCG GGCCGCGGCT TCGGCACGCA CCCGCACCGC
GACATGGAAA TCCTGTCGTA CGTGCTGGAC GGTGCGCTGG AGCACAAGGA TTCGATGGGC
ACCGGGTCGG TGATCGTGCC GGGCGACGTC CAGTTGATGA GCGCGGGTAC CGGCGTGCGT
CACAGCGAGT TCAACCACTC GCACGAAACG CCTGTCCACT TCCTGCAGAT CTGGGTCGGA
CCGTCCGAGA AGGGTGCCGA GCCGCGCTAT CAGCAGACGA ATGTCGCGGA GGCCGACAAG
CGCGGCAAGC TCACGCCGAT CGTGTCGCCC GACGGTAACG GCGGTTCGCT GAAGATCCGC
CAGGACACGC GGATCTACGC GGGCCTGTTC GACGGCGACG AGCGCGCCAC GCTCGAACTG
GCACCGGGCC GCTTCGCCTA CGTGCATGTC GCACGTGGCA GCGTGACGGT CAACGGCGTG
ACGCTCGGCG AAGGTGACGG CGCACGTATC CGCGACGAAC AGGCGCTGAC GTTCGCCGAC
GGCAAGGATG CCGAGGTGCT GGTATTCGAC CTGCGCCCGG TCGAAGTGAC GGCCGAGTGG
GCGTGA
 
Protein sequence
MIETRAANQR GHAEHGWLSS RHTFSFANYY DPKQVGFSDL LVINDDRVAP GRGFGTHPHR 
DMEILSYVLD GALEHKDSMG TGSVIVPGDV QLMSAGTGVR HSEFNHSHET PVHFLQIWVG
PSEKGAEPRY QQTNVAEADK RGKLTPIVSP DGNGGSLKIR QDTRIYAGLF DGDERATLEL
APGRFAYVHV ARGSVTVNGV TLGEGDGARI RDEQALTFAD GKDAEVLVFD LRPVEVTAEW
A