Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5842 |
Symbol | |
ID | 6182652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 373784 |
End bp | 374509 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641688977 |
Product | pirin domain-containing protein |
Protein accession | YP_001815836 |
Protein GI | 172065124 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGA CTCGTGCAGC AAACCAACGT GGCCATGCCG AACACGGCTG GCTCAGCTCC CGTCACACGT TTTCGTTCGC GAACTACTAC GATCCGAAGC AAGTCGGCTT CTCCGACCTG CTGGTGATCA ACGACGACCG CGTCGCACCG GGCCGCGGCT TCGGCACGCA CCCGCACCGC GACATGGAAA TCCTGTCGTA CGTGCTGGAC GGTGCGCTGG AGCACAAGGA TTCGATGGGC ACCGGGTCGG TGATCGTGCC GGGCGACGTC CAGTTGATGA GCGCGGGTAC CGGCGTGCGT CACAGCGAGT TCAACCACTC GCACGAAACG CCTGTCCACT TCCTGCAGAT CTGGGTCGGA CCGTCCGAGA AGGGTGCCGA GCCGCGCTAT CAGCAGACGA ATGTCGCGGA GGCCGACAAG CGCGGCAAGC TCACGCCGAT CGTGTCGCCC GACGGTAACG GCGGTTCGCT GAAGATCCGC CAGGACACGC GGATCTACGC GGGCCTGTTC GACGGCGACG AGCGCGCCAC GCTCGAACTG GCACCGGGCC GCTTCGCCTA CGTGCATGTC GCACGTGGCA GCGTGACGGT CAACGGCGTG ACGCTCGGCG AAGGTGACGG CGCACGTATC CGCGACGAAC AGGCGCTGAC GTTCGCCGAC GGCAAGGATG CCGAGGTGCT GGTATTCGAC CTGCGCCCGG TCGAAGTGAC GGCCGAGTGG GCGTGA
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Protein sequence | MIETRAANQR GHAEHGWLSS RHTFSFANYY DPKQVGFSDL LVINDDRVAP GRGFGTHPHR DMEILSYVLD GALEHKDSMG TGSVIVPGDV QLMSAGTGVR HSEFNHSHET PVHFLQIWVG PSEKGAEPRY QQTNVAEADK RGKLTPIVSP DGNGGSLKIR QDTRIYAGLF DGDERATLEL APGRFAYVHV ARGSVTVNGV TLGEGDGARI RDEQALTFAD GKDAEVLVFD LRPVEVTAEW A
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