| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5841 |
|---|
| Symbol | |
|---|
| ID | 6182651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 373115 |
|---|
| End bp | 373717 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641688976 |
|---|
| Product | TrpR binding protein WrbA |
|---|
| Protein accession | YP_001815835 |
|---|
| Protein GI | 172065123 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0655] Multimeric flavodoxin WrbA |
|---|
| TIGRFAM ID | [TIGR01755] NAD(P)H:quinone oxidoreductase, type IV |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.823521 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGG TACTCGTTCT TTACTACTCG TCCTACGGGC ACGTCGAAAC GATGGCGCAG
CACGTCGCGG AAGGCGCGAA ATCGGTGCCC GGTGTCGAGG TCACGCTCAA GCGCGTGCCG
GAAACCATCC CCGCCGACCA GGCGAAGGCC ATCGGCGTGA AGGTCGACCA GGCCGCGCCC
GTCGCCACCG TGGACGAGCT CCCGAACTAC GACGCGATCA TCTTCGGCAC GCCGACCCGC
TTCGGCAACA TGGCCGGCCA GATGCGCACC TTCCTCGACC AGACCGGCTG CCTCTGGATG
AAGGGCGCGC TCGTCGGCAA GATCGGCAGC GTGTTCGCGT CGACCGGCAC GCAGCACGGC
GGCCAGGAAA CGACCATCAC GTCGTTCCAC ACGACGCTGC TGCACCAGGG GATGGTGATC
GTGGGCGTGC CCTACGCATG CAGCGGGCTC GTCAACATGA GCGAGATCAC GGGCGGCACG
CCGTACGGCG CGACCACGCT CGCCGGTGCG GACGGCAGCC GTCAGCCGAG CGCGAACGAG
CTCGACATCG CGCGCTATCA GGGCAAGCAC GTCGCGGAAC TGGCCGTGAA GCTCGCGTCG
TAA
|
|---|
| Protein sequence | MAKVLVLYYS SYGHVETMAQ HVAEGAKSVP GVEVTLKRVP ETIPADQAKA IGVKVDQAAP
VATVDELPNY DAIIFGTPTR FGNMAGQMRT FLDQTGCLWM KGALVGKIGS VFASTGTQHG
GQETTITSFH TTLLHQGMVI VGVPYACSGL VNMSEITGGT PYGATTLAGA DGSRQPSANE
LDIARYQGKH VAELAVKLAS
|
|---|
| |