| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5810 |
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| Symbol | |
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| ID | 6182060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 345284 |
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| End bp | 345970 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641688945 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001815804 |
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| Protein GI | 172065092 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.809704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGT TGTCGCGCGC GCTGAGCTTC GACGATGTAT TCGAAATCGT TGCCGCACAG
GCACGCGCGC TCGATTTTGA AATGTGCGCC TATGGCGCAC GCGACCCGCT ACCCGTGACG
CGGCCCACGT TCCGTACACG CAATACCTAT CCGGAATCCT GGCAACAGCG CTACATCGAG
GGAAACTATT TCGCACGCGA CCCCGTCGTC CGTTACGGGC TGATCTATAC GTCACCGCTT
GTATGGCCCG TCGACGCATG CGCCGACGAA TCATTCTGGG AGGAAGCGAA GGCGCATGGG
GTTGCGCACG GCTGGTCGCA GCCCATTCGC GACAAGCACG GGCGCATCGC GATGTGGAGC
GTCGCGCGCA GCGCGGACCC CATTTCGGAT CTCGAACTTG CCGCCACGGA AAGCCGGCTG
ATCTATCTGG CGCACGCCGC TCACGCGGTG AATTCGCGCC TGGTCGACGC GCCCGCGGCC
GCGATGCAAA TGGGCCCGTT CACCACGCGC GAAAAGGAAG TGCTGAAATG GGCCGCTGAC
GGGAAGACCG CGCTGGAAAT CGCTTCCATT CTTTCCATCT CGGAGCGAAC CATCACCTTC
CACATGCAGA ACATCATGGA GAAACTCAAC TCGGTCAACA AGACACAAGC GATCGTCAAG
GCCGTGTTGC TCGGCATCAT CTACTAA
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| Protein sequence | MTTLSRALSF DDVFEIVAAQ ARALDFEMCA YGARDPLPVT RPTFRTRNTY PESWQQRYIE
GNYFARDPVV RYGLIYTSPL VWPVDACADE SFWEEAKAHG VAHGWSQPIR DKHGRIAMWS
VARSADPISD LELAATESRL IYLAHAAHAV NSRLVDAPAA AMQMGPFTTR EKEVLKWAAD
GKTALEIASI LSISERTITF HMQNIMEKLN SVNKTQAIVK AVLLGIIY
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