Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5773 |
Symbol | |
ID | 6182518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 299955 |
End bp | 301367 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641688909 |
Product | transcriptional regulator |
Protein accession | YP_001815768 |
Protein GI | 172065056 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.272956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGGA CCGAGGTATC GGCGCGCTGG CACGACGCGA TCGGCGCGGT GCACGGCATC GAGTCGAAAT ACAAGCGGCT CGTGAAGGCG ATCGCCACCG ACATCGAAAG CGGCGCGCTC GCACCGGGCG CGCGGCTCGC GCCGCAGCGC GACGTGGCGT CGAGCCTCGG CGTCAGCGTG CAGACCGTCA CCAATGCCTA CAAGGAACTC GAAAGGCAGG GCCTGATCCG CTGCGAAGTC GGGCGCGGCA GCTTCGTGGC CGCCCGCGTG ACCGAATCGA TGTCGAACTA CATCCTCGAT ACGGCCGAGC GCGAGCTGGT CGACTTCTCG ATCGCGCGCA TCGTGCATAC GCCGGAGCAC GATGCCGCAT GGCGGAGCGT CTGCGCAGCG ATGGCCGACA CCGACGACCA GCCATGGATC CGCTCGTTCC GGCCGATCGC GGGCCTCGAC GCGCATCGCG AGGCTGGCGC CGCGTGGCTC GGTTCGCTGA ACCTGCCGGT CCATCCCGAA TCGCTGCTGA TCACGAACGG CGCGGCGCAC GGGATCTTTC TCGCGCTCGC GTCGATCGTC GGGCCGGGCG ACACCGTGCT GTGCGAGAGC CTGACCGACC ACGGCGTGAT CGGCTCGGCG AACGTGCTCG GGTTTACGCT GAAAGGGCTC GAGATGGACG AACATGGGAT CCGTCCCGAA CATTTCGAGG AAATGTGCGA CGGCGAGCGC ATCAGTGCGC TCGTCTGCAC GCCGACCCTC AATAACCCGA CGGTGTCGAT GATGTCCGAT TCGCGCCGCA AGTCGATTGC GCGCATCGCA TCACGCTACG GCGTGTACGT GATCGAGGAC GACGTGTACG GCCCGCTCCC CGCGAAGACG GCGACGCCGA TCGCGAGCCT GATCCCGGAG CTCGGCTTCT ACTGCACGAG CATGACGAAA TCCGTGCTGA CCGGGCTGCG CACCGGTTAT CTCGCGATGC CGAGGCGGCT TGCGTTGCGC GTCGAGAGCG TGCTGCGCGT GAGCAGCTGG ATGGCGACGT CGCCGATCGC GGAGATCGCG ACGCGTTGGA TCGCCGACGG CACCGCGCGC AGGCTCGTGG AGTTGCAGCG CCAGCGGCTC GCGGCGCGTC AGGAGATGGT GAAGGCCGCG CTTGGCCCCT ATGTGCTGGG TGCGCATCCG AATGCATTGT CAGCGTGGCT GCGCGTGCCG GACTACTGGC AGGCCGACCG GCTCGTGCGC GAATTGCGTA CCCGCAAGAT CGCGGTGACG TCGCCCGACC CGTTCCTCGT CGGCGGCACG GAGCGGCCGA ACGCGGTGCG CGTGTGCATC GGCGCGGAGA CGACGGATGC CGCATGCAAC GCCGCGCTCC AGACCATCGC GGGCGTGTTC GAGCAGTATC CGCACGTGCA CGATTTTCAC TGA
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Protein sequence | MGRTEVSARW HDAIGAVHGI ESKYKRLVKA IATDIESGAL APGARLAPQR DVASSLGVSV QTVTNAYKEL ERQGLIRCEV GRGSFVAARV TESMSNYILD TAERELVDFS IARIVHTPEH DAAWRSVCAA MADTDDQPWI RSFRPIAGLD AHREAGAAWL GSLNLPVHPE SLLITNGAAH GIFLALASIV GPGDTVLCES LTDHGVIGSA NVLGFTLKGL EMDEHGIRPE HFEEMCDGER ISALVCTPTL NNPTVSMMSD SRRKSIARIA SRYGVYVIED DVYGPLPAKT ATPIASLIPE LGFYCTSMTK SVLTGLRTGY LAMPRRLALR VESVLRVSSW MATSPIAEIA TRWIADGTAR RLVELQRQRL AARQEMVKAA LGPYVLGAHP NALSAWLRVP DYWQADRLVR ELRTRKIAVT SPDPFLVGGT ERPNAVRVCI GAETTDAACN AALQTIAGVF EQYPHVHDFH
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