Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5759 |
Symbol | |
ID | 6181876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 286516 |
End bp | 287640 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641688895 |
Product | Zn-dependent hydrolase of the beta-lactamase fold-like protein |
Protein accession | YP_001815754 |
Protein GI | 172065042 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.177661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.774373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCGC CTCTCGTTTT TCTTCATCGC GTACTGGGTT TCGCCGCCGC CAGGCGTGGC CGCACACTGT CCGGCGAGTC GCCGCAGCAC AATGGCGAAC GCTTTAGTAA CGTCGCGCCG CGACCGGTCG AGGGCTTCGG CAAGACGCTC GGCATTGCAT GGAACATGCT GCTCAACAAA CCACGCAACA CGGTTCCGAC CGGTGCCCTG CCGATCGATT CACTGACTCG CGAGCAACTC GACGCGGCCC CTGACCGCAG CCTGTATCGG CTCGGGCATT CGACGCTGCT GTTGAAGCTG CGCGGTGAGT TCTGGCTGAC CGATCCGGTA TTTGCCGAAC GTGCATCGCC GTTTCGACGC GTCGGCCCCA AGCGCTTCCA TGCGCCGCCG ATTGCGCTCG ACGATCTCCC GCCGTTGCGC GGTGTGATCC TGTCGCACGA TCACTACGAT CACCTCGATC GTGACACGGT GCTCGCGCTC GCGGCCACGA CTGGCGTGTT CGTCACGACG CTGGGTGTGG GCGACCGCCT GATCGAGTGG GGTATCGACG CGAAGAAGGT GCGCCAGCTC GACTGGTGGC AAAGCGTCGA CGTCGCCGGC CTGACACTGA CTGCAACACC GGCGCAGCAC TTCTCCGGGC GCAGCCTGTT TGACGGCAAC AGCACGCTGT GGGCGTCCTG GGTCATCGTC GCCGACGATC TGCGCGTGTT CTTCAGCGGC GACACAGGTT ACTTCGACGG TTTCCGGACA ATCGGCGAAC GTCTTGGGCC CTTCGATGTG ACGCTGATCG AGACCGGCGC ATACGACCCG CAATGGCCCT ACGTGCATAT GCAGCCGGAA GAAACCGTGC AGGCGCACAT CGACCTGCGC GGACGCACGC TGATACCGAT TCACAACGGC ACGTTCGATC TCGCGATGCA TCGTTGGCAG GAGCCGTTCG AGCGCGTCAC GGCGTTGGCA ATGGTGCGAG GCGTCGAGCT GTCAACGCCC AGGATGGGCG AGCGACTCGA TCTGACTGAG CCGCATCGCG GGGAACGGTG GTGGCGAACC GTCGATGACG CAGAAAAGGC ACCGGCGGCG AAGCCGCGCC GGTGGCAGCT ATGCGCATCG CAGACGACGA AGTAG
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Protein sequence | MASPLVFLHR VLGFAAARRG RTLSGESPQH NGERFSNVAP RPVEGFGKTL GIAWNMLLNK PRNTVPTGAL PIDSLTREQL DAAPDRSLYR LGHSTLLLKL RGEFWLTDPV FAERASPFRR VGPKRFHAPP IALDDLPPLR GVILSHDHYD HLDRDTVLAL AATTGVFVTT LGVGDRLIEW GIDAKKVRQL DWWQSVDVAG LTLTATPAQH FSGRSLFDGN STLWASWVIV ADDLRVFFSG DTGYFDGFRT IGERLGPFDV TLIETGAYDP QWPYVHMQPE ETVQAHIDLR GRTLIPIHNG TFDLAMHRWQ EPFERVTALA MVRGVELSTP RMGERLDLTE PHRGERWWRT VDDAEKAPAA KPRRWQLCAS QTTK
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