| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5744 |
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| Symbol | |
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| ID | 6181861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 267737 |
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| End bp | 268414 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641688880 |
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| Product | two component heavy metal response transcriptional regulator |
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| Protein accession | YP_001815739 |
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| Protein GI | 172065027 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0360294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.749662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCATCC TGATAGTCGA AGACGAACCG AAGACGGCCG CGTACTTGAA GAAAGGCCTC
GAGGAATCCG GCTTCAGCAT CGATCTTGCG AAGGACGGCG CGGAAGGGCT GATGCTCGCG
CAGGAAGAGA ACTACGACGT GATCGTGCTC GACGTGATGC TGCCCGTGCT CGACGGGTGG
GGCGTGCTCA AGCGCCTGCG CGACACCCAC ACGACGCCCG TGCTGTTCCT GACCGCGCGC
GACGATGTGC AGGACCGCGT GCACGGTCTC GAGCTGGGCG CCGATGATTA CCTCGTGAAG
CCGTTCGCGT TCGTCGAACT GCTCGCGCGC ATCCGCACGC TTGCGCGCCG CGGGCCACCG
CGCGAGACCG AGCGCATCGT GGTCGGCGAC CTGGAAATCG ACGTCGTGCG CCGCCGCGTG
AAGCGCGGCA CGGTGCGGAT CGACCTGACG CCACGCGAGT TCTCGCTGCT GCAGTTGCTC
GCGCGCCGGC AAGGCGAAGT GCTGAGCCGC ACGCAGATCG CGTCGTATGT CTGGGACATG
AACTTCGACA GCGACACCAA CGTCGTCGAA GTCGCCATCC GGCGACTGCG CGCGAAGATC
GACGATGCGT TTCCGGTCAA GCTGATCCAT ACGGTGCGCG GCGTAGGCTA CGTGCTCGAA
CCGAAGGACG GTGCATGA
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| Protein sequence | MRILIVEDEP KTAAYLKKGL EESGFSIDLA KDGAEGLMLA QEENYDVIVL DVMLPVLDGW
GVLKRLRDTH TTPVLFLTAR DDVQDRVHGL ELGADDYLVK PFAFVELLAR IRTLARRGPP
RETERIVVGD LEIDVVRRRV KRGTVRIDLT PREFSLLQLL ARRQGEVLSR TQIASYVWDM
NFDSDTNVVE VAIRRLRAKI DDAFPVKLIH TVRGVGYVLE PKDGA
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