| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5726 |
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| Symbol | |
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| ID | 6181910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 238205 |
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| End bp | 238972 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641688857 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001815721 |
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| Protein GI | 172065009 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCG AGGATCGCGT TTTTCTGATT ACGGGCGCCG GTTCGGGCCT CGGCGCCGCA
GTGGCGCGCA TGGTGGTGGC CGAAGGCGGC AAGGCGGTTT TGCTGGACGT CAATGAGGAT
GCCGGCACGA GCCTCGCGCA CGAACTCGGT GCGGCTGCAT GCTTCGTGAA GACCGACGTG
ACGAGCGAAG CCGACGGGCA AGCTGCCGTC GCCGCCGCGC GCGACGCGTT CGGCCGCATC
GATGCGCTCG TGAACTGCGC GGGCGTCGCG CCGGGCGAGA AAGTCGTCGG CCGCGAAGGT
CCGCATTCGC TCGAGCGCTT CGCGCGCGCG GTGTCGATCA ACCTGGTCGG CACGTTCAAC
ATGATCCGCC TGGCGGCCGA AGTAATGTCG AAGCAGGACG CCGACGCGCA AGGCGAGCGC
GGCGTGATCG TCAACACCGC GTCGGTCGCG GCGTTCGACG GGCAGATCGG GCAGGCCGCG
TATGCGGCAT CGAAGAGCGG CGTGGTGGGC ATGACGCTGC CGATCGCGCG CGAACTCGCG
CGGTTCGGCA TTCGCGTGGT GACGATCGCG CCGGGCATCT TCGAGACGCC GATGATGGCC
GGCATGCCGA AGGACGTGCA GGACGCGCTC GGCAAGAGCG TGCCTTTCCC GCCGCGGCTC
GGCCGCCCCG ACGAATTCGC GGCGCTGGTG CGCCACATCG CCGAGAACAC GATGCTGAAC
GGCGAAGTCA TCCGTCTCGA TGGCGCGTTG CGCATGGCGC CGCGCTGA
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| Protein sequence | MNIEDRVFLI TGAGSGLGAA VARMVVAEGG KAVLLDVNED AGTSLAHELG AAACFVKTDV
TSEADGQAAV AAARDAFGRI DALVNCAGVA PGEKVVGREG PHSLERFARA VSINLVGTFN
MIRLAAEVMS KQDADAQGER GVIVNTASVA AFDGQIGQAA YAASKSGVVG MTLPIARELA
RFGIRVVTIA PGIFETPMMA GMPKDVQDAL GKSVPFPPRL GRPDEFAALV RHIAENTMLN
GEVIRLDGAL RMAPR
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