| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5721 |
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| Symbol | |
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| ID | 6181905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 231690 |
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| End bp | 232997 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641688852 |
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| Product | dihydropyrimidine dehydrogenase |
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| Protein accession | YP_001815716 |
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| Protein GI | 172065004 |
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| COG category | [C] Energy production and conversion
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase
[COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit |
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| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.85505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.854887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACC TTCGCTGCAC CATCGCAGGC ATCACTTCGC CGAATCCCTT CTGGCTCGCG
TCCGCGCCGC CGACCGACAA GGCCTACAAC GTCAACCGCG CGTTCGAGGC GGGCTGGGGC
GGCGTCGTCT GGAAGACGCT CGGGCTCGAT CCGCACGTCG TCAACGTCAG CTCGCGCTAC
GGCGCGGTGC AGTGGAACGG CCAGCGGATC GCCGGGCTGA ACAACATCGA GCTGATCACC
GACCGTCCGC TCGACGTGAA CCTGAGAGAG ATCGCGCAGG TGAAGCGCGA CTGGCCCGAC
CGCGCGCTGA TCGTGTCGCT GATGGTGCCG TGCAACGAGC GCGACTGGAA ATGGATCCTG
CCGCTCGTCG AGGACACGGG CGCCGACGCG GTCGAGCTGA ACTTCGGCTG CCCGCACGGG
ATGAGCGAGC GCGGGATGGG CGCGGCCGTC GGGCAGGTGC CGGAATACGT CGAGATGGTC
ACGCGCTGGG TCAAGGAAGG CACGAAGCTG CCGTGCCTCG TGAAGCTCAC GCCGAACATC
AGCGACATCC GGATGGGCTC GCGCGCCGCC TACAAGGGCG GCGCGGACGG CGTGTCGCTG
ATCAACACGA TCAACTCGAT CGTCGCGGTG GACCTCGACC AGATGGCGCC GATGCCGACC
GTCGACGGCA AGGGCACGCA CGGCGGCTAT TGCGGCCCCG CGGTCAAGCC GATCGCGCTG
AACATGGTCG CGGAGATCGC GCGCGACCCG GAAACGCCGA ACCTGCCGAT TTCCGGCATC
GGCGGGATTT CGTCGTGGCG CGACGCGGCC GAGTTCATGG TGCTCGGCGC CGGCAGCGTG
CAGGTATGCA CCGCCGCGAT GCACTACGGC TTCCGGATCG TGACGGATCT CGCCGACGGG
CTGTCGAACT GGATGGACGA GAAGGGCTAC GCGACGCTCG ACGACATCCG CGGCCGCGCG
GTGCCGAACG TCACCGACTG GAAATACCTG AACCTGAAAT ACGACATCAA GGCGCGCATC
GACCAGGACC GCTGCATCCA GTGCGGGTTG TGCCATATCG CGTGCGAGGA CACGTCGCAC
CAGGCGATCA CCGCCCAGAA GGACGGCGTG CGGCATTTCG AAGTGGTGGA CGCGGAGTGC
GTCGGGTGCA ATCTTTGCAT GCATGTGTGT CCGGTCGAGC AATGCATCAC GATGGAGCGG
GTCGACGCCG GCGACTATGC GAACTGGACC ACGCATCCGA ACAATCCGGC GCGTGCCGAC
GCGGGTGCGG GCCCGGTGGA ACCCGCGAAG CACGCGAAGG CGGCCTGA
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| Protein sequence | MADLRCTIAG ITSPNPFWLA SAPPTDKAYN VNRAFEAGWG GVVWKTLGLD PHVVNVSSRY
GAVQWNGQRI AGLNNIELIT DRPLDVNLRE IAQVKRDWPD RALIVSLMVP CNERDWKWIL
PLVEDTGADA VELNFGCPHG MSERGMGAAV GQVPEYVEMV TRWVKEGTKL PCLVKLTPNI
SDIRMGSRAA YKGGADGVSL INTINSIVAV DLDQMAPMPT VDGKGTHGGY CGPAVKPIAL
NMVAEIARDP ETPNLPISGI GGISSWRDAA EFMVLGAGSV QVCTAAMHYG FRIVTDLADG
LSNWMDEKGY ATLDDIRGRA VPNVTDWKYL NLKYDIKARI DQDRCIQCGL CHIACEDTSH
QAITAQKDGV RHFEVVDAEC VGCNLCMHVC PVEQCITMER VDAGDYANWT THPNNPARAD
AGAGPVEPAK HAKAA
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