| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5703 |
|---|
| Symbol | |
|---|
| ID | 6181956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | + |
|---|
| Start bp | 214245 |
|---|
| End bp | 214724 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641688835 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001815699 |
|---|
| Protein GI | 172064987 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3558] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.176651 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCAC CCGCAGCAAT TCGCCCGCCG CTCCCCCCGT TCACGCTGGA GACGGCCATC
GAGAAAGTCC GTCTCGCGGA AGATGGCTGG AATTCGCGCG ACGCCGCCAA GGTCGCGCTC
GCCTATTCGC TCGACACGAA ATGGCGCAAT CGCGCAGAGT TCGCGAATAA TCGAGCGGAA
GCGCAGGCGT TCCTCGAGCG CAAGTGGAAG AAGGAGCACG AGTATCGTCT GATCAAGGAA
CTGTGGGCGT TCGGCGGCAA TCGCATTGCC GTACGCTACG CCTACGAATG GCACGACGAC
TCGGGCAACT GGTTCCGCTC CTACGGCAAC GAGAACTGGG AGTTCGGCGA GGATGGCCTT
ATGCAGCGCC GCTATGCGTG CATCAACGAC ATGCCGATCA AGGAATCCGA GCGCAAGTAT
CACTGGCCCC TGGGCCGTCG GCCGGACGAT CATCCGGGGC TGAGCGAGTT GGGGCTTTGA
|
|---|
| Protein sequence | MTSPAAIRPP LPPFTLETAI EKVRLAEDGW NSRDAAKVAL AYSLDTKWRN RAEFANNRAE
AQAFLERKWK KEHEYRLIKE LWAFGGNRIA VRYAYEWHDD SGNWFRSYGN ENWEFGEDGL
MQRRYACIND MPIKESERKY HWPLGRRPDD HPGLSELGL
|
|---|
| |