Gene BamMC406_5679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5679 
Symbol 
ID6182089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp189438 
End bp189998 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content70% 
IMG OID641688811 
ProductRossmann fold nucleotide-binding protein-like protein 
Protein accessionYP_001815675 
Protein GI172064963 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000903991 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0372691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCA TTGGCGTGAT GGGCTCGGGC AAGAACGAAT GGCCGGAGTT GGCGACGCCG 
CTCGGAACGT GGATCGCCGC GCAAGGATTC GACCTGCTGA CCGGCGCCGG CCGCGGCGTG
ATGCTGTCGA TCGCGCGCGC GTACGCGACG ACGCCGGGGC GCCGCGGCCG CTCGATCGGC
ATCGTGCCGA GCGAAGCGCA CCCGCTGTTC GGCTTCGTGC CGATCGCCGG CTATCCGAAT
CCGTTCATCG ACCTGCCTAT CGTCACGCCA CTGCCGCGCA AGGAAGCGGA CGCGCCGGAC
GACGCATTGA GCCGCAACTA CGTAAACGTG CTGACGAGCG ACGTCGTCGT CGCGCTGCCG
GGGAGCAAGG GCACGCTCGA CGAGATCCGC CTCGCGACGC GCTTCGCGAA GCCGTTGATC
TGCACCGGGC CCGCGAGCGC GTTCGATGGC GTCGCGGCCG GCACGCGCAT CGTGTCGGCG
CTCGATGACG TCTATGCATT CGTGCTCGCG CACGTGAACC GCGCGGAAGG CGGCGCGGGC
GCACACGTTC CGTCGGCGTG A
 
Protein sequence
MAIIGVMGSG KNEWPELATP LGTWIAAQGF DLLTGAGRGV MLSIARAYAT TPGRRGRSIG 
IVPSEAHPLF GFVPIAGYPN PFIDLPIVTP LPRKEADAPD DALSRNYVNV LTSDVVVALP
GSKGTLDEIR LATRFAKPLI CTGPASAFDG VAAGTRIVSA LDDVYAFVLA HVNRAEGGAG
AHVPSA