Gene BamMC406_5664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5664 
Symbol 
ID6182119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp170242 
End bp171402 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content72% 
IMG OID641688796 
Producthypothetical protein 
Protein accessionYP_001815660 
Protein GI172064948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.456577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00919301 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGCCGG CAATTCGGGC GCTGCTGTGC GGCGTCTGGT TCGCCTGCAC GGTCGCGCAC 
GCTTCCGATC AGCAAGTAAT CGTCGACGGC GGGCAGCGCC TGGGCGGCGT CGTGCGCACG
GGCGGCCACG ACGTTCCGTT GCTGCGCGCG CTCGAGCAGA TCATGCCGAC GAGTTACAGC
ATCAATGTGC CGAACGCGGG CGCATGGGCC GACGCGTCCG TGAGCTGGCG CGCCGGCTCG
TCGGTCGTGC ACGCGCTCGG CGAGGTGCTG TCGGTCGATC CTGCGCTGCA GGCGCGCGTC
GATACGGATA TGCATTTGCT CACGGTGACC GCGCATGCGC GGCGCGCAAA CGTTGACGCG
CCGCAGCCTT CCTCGCCGGC GGCCGGCGCG GCGTCGCGCA TGAACAGTGC CGCCACGAAT
GCGTCTTCCA CCGTGCCCAC GGGCGCGGCG ACGATGGCTC CCGCGGCGGG ACCTGCCATT
GCAGCGGCGC AGCCCCTGGT GCAGGCGCGC GTTTCGACGT GGATACCCGC AACGCCGGCA
TCGGCTCGCA TACCGGCGGC AACGCTGGCG GTCCCGCCCG TGCCGGCATC GGCACCGGCG
CCCGCGCCCG CTCCGGTGAT GTCGTCCGCA CCGGCGGCCG GGCCGGCCAT GCCGGCATCG
GCACCAGCAC CCGCGCCCGC TTTGGCGATG CCGCCCGCAC CGGCACCCGC ACCGGCCATG
CCGGCACCGG TACCGGCGCT TGTTTCAGCA CCGCCGCGAG CGCAGGTACC CGCGCCCGCA
AAGCGTGACG CCATCGAGCC CCCGTTGCTC GCCGCCACGC AACCGGCGTC CGGCCCGGCC
TCCCCGGCGC CATCGTCGGC GCCCGCCGCG ACTCCGGCGT TCGTACCCGC GGCGGCGCCC
GAGCGCACGG AGTGGCAGAT GCGCCTGTCG GACGGCTCCG TGCGCAATGC GCTCGCGCGC
TGGGCGAGCG AAGCCGGCTG GCAATTCATC TGGGACGTGC CGACCGATTT TCAGGTCGAC
GCGACGGCCA CGATACACGG CACGCTCGCC GAAGCGCTGC GTCAGGTGAC CAATGCGCTC
GCCGGCTCGC AGGTGCCGAT TCAGGTGGTC TTGTACCAGC GCAACCACGT CATGCGCGTC
GTTCCCAAAG GAGCAAGTTG A
 
Protein sequence
MPPAIRALLC GVWFACTVAH ASDQQVIVDG GQRLGGVVRT GGHDVPLLRA LEQIMPTSYS 
INVPNAGAWA DASVSWRAGS SVVHALGEVL SVDPALQARV DTDMHLLTVT AHARRANVDA
PQPSSPAAGA ASRMNSAATN ASSTVPTGAA TMAPAAGPAI AAAQPLVQAR VSTWIPATPA
SARIPAATLA VPPVPASAPA PAPAPVMSSA PAAGPAMPAS APAPAPALAM PPAPAPAPAM
PAPVPALVSA PPRAQVPAPA KRDAIEPPLL AATQPASGPA SPAPSSAPAA TPAFVPAAAP
ERTEWQMRLS DGSVRNALAR WASEAGWQFI WDVPTDFQVD ATATIHGTLA EALRQVTNAL
AGSQVPIQVV LYQRNHVMRV VPKGAS