Gene BamMC406_5657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5657 
Symbol 
ID6182112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp162531 
End bp163010 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content72% 
IMG OID641688789 
ProductPilM; PilM 
Protein accessionYP_001815653 
Protein GI172064941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00696203 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCCTGA TCTGGATCGT CGCCGCCTTC GCGATGCTTA CCGGTGCCTA CGCGCTGCTC 
GGCGCCGAGG CGGCGCCGGC ACCGCTCGCG CCGTCGGCGA TGGCGCTCGC GGCGAACATG
AGCGCCTACC GGCAGGCCGT GGTGGCTTTC GCGCGCGCCA ACCCGTCGTT CGCTGGCAGC
GTGCCGGCGG CGAGCCTCGC GCCCTACCTC GGGGCGACCG TTCCCAATCC GGTGTGGCGG
AACTACGTCC AGCCCAATAC CGGCTATGCG GGCAGCCTGG TCGTGGTCTA TGCGGCGTCG
GCGTCGGCCG CGGCCGCGGT CGACGGCATC GAGCAGATTG CGCAGGGCTC GGCGCTGGCC
GGCGTGGCGC TCGGCGCCAA CCTCGTGTCC CCCGGCAACC CGGCCGTGCC GCTGCCGGCC
GCATTGGCGA ACACGATCCC GAACGGCATG CCGGTATGGA TGGCGCAAGC GTATGACTGA
 
Protein sequence
MFLIWIVAAF AMLTGAYALL GAEAAPAPLA PSAMALAANM SAYRQAVVAF ARANPSFAGS 
VPAASLAPYL GATVPNPVWR NYVQPNTGYA GSLVVVYAAS ASAAAAVDGI EQIAQGSALA
GVALGANLVS PGNPAVPLPA ALANTIPNGM PVWMAQAYD