| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5597 |
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| Symbol | |
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| ID | 6182680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 91406 |
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| End bp | 93181 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641688729 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001815593 |
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| Protein GI | 172064881 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.354046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCA TTGGAACGCT TCACGTTTTT CCCGACAGAC GTGAAATTCG CGCGAACGGC
GAACTGTTGC GCATCGGCAG CCGTGCATTC GAAATTCTCG AACTCCTGAT TCAGGCAAAT
GGCGCGCTGG TCTCGAAAGA CGAGATCATG CAGCGCGTGT GGCCGCACAC GTTCGTGGAG
GAAAACAACC TGCAGGTGCA TATCGCGTCG TTGCGCAAGG CGCTGGGCCA GGACCGGGAT
CTGATCGTCA CGGTGCCCGG GCGCGGCTAT CGGCTCGTCA GCGCGCCCGC CGAAGGCGCG
GCTGCCGTGC GCTCCGCGAC CTCCTGGCTC GCGCCCGCGC CGACCGCGCT CGTGGGGCGC
GAGCAGATGG TCGCCGATGT CCTCGCGGCG CTCGACGCGT CGCGCGTCGT GACGCTGGTC
GGCGCGGGCG GCATCGGCAA GACGCGCGTC GCGGTCGAAG CCGCGCTCCG GGCCGAGGCG
CGCTTTCCGG ATGGCACGGC GTTCGTGTCG CTGGCGACGG TGGCGTGCCC GCAATTCGTT
CCCGCCGCGC TGGCCGACGC GCTGGACCTC GCGCTGCCGG CCCGCTCGCT GACGCTCGAA
GCGGTGCTGG CGAGCGTCGC GCATCGCAGG ATGTTGCTCG TGCTCGACAA CTGCGAGCAT
CTGCTGGACG CGGCCGCGCG GATCGCCGCG GTGTTGACCG AGTCCGATAC CGGGCTGCGC
GTGCTGGCGA CCAGCCGCGA GGCGCTTCGG ATCCACGGCG AGCGACAGTG TCCGGTGCCG
CCGCTCGAGA TCGGCGACGA AGGTGCCGAC GCGGCCGACA TGCTGGGCGC AAGCGCGGTG
CAATTGTTCG CGGCACGCGC GTGCGCCGCC GATCCGCGCT TTCCGCTCGA CGAACGCAGC
GTGTCGCTGA TGGCGTCGGT GTGCCGGCAT CTCGACGGCC TGCCGCTGGC GATCGAGCTG
GCCGCTGCCC GCGCGGCCGT GCTCGGCATC GACGTACTGG CCGATCATCT CGACGACCAT
TTCCGGTTGC TGACCGGCGG TTTTCGCACG GCATTGCCAC GCCATCGGAC GCTGCAGGCG
ATGTACGACT GGAGCTACCG CTTGCTGGCG GACGCGGAGC GCGTGCTGTT GCGCTGGCTC
GGCGTGTTCC GCGACGGTTT TTCGATCGAG GCGGTGCGGG ACATCGTCGG CACGAAGGGG
CTGGCCGATG CGGACCTGCT CGACACGATC GCCGGCCTGG TGTCGAAGTC GCTCGTGAAC
GTCGAGAATG CGCACGGCGT GCCGCGCTAC CGACTGTTGA CGACGACGCG CGCGTATGCG
CTGCAGCAGC TCGAGAACAA CGGCGAATGC GCGGCCGCCG CGCTCGCGCA CGCGAACTAC
TTCCTCACAT TGTTCACGCT GGCGCCCGAC GGCGGCGATG GGTCGCCGGC CGAAGCGCGG
CGCGATCAGG TGCGCCGCGA ACTCGGCAAT CTGCGCGCGG CGCTCGACTG GGCATTTTCG
CCGGACGGGC ACGCGGAGAC CGGCATCGCG CTGGCGGCAG TGGCGGTGCC GTGCCTGCTG
GACCTGTCGC TCGTGGACGA GTGTCGCGAA CGCGCGCGCG TGGCGCTTGA CGCGATGCGG
GATCTGGATG CGACGCCGGC CCGAGACGAT GCGCGCAAGC GCCTGCTGGC CGCGTATGCC
GCGGCACTCG CGCAGGGCTC CGGGTCGACC CGCGGCGTTC GCGACGCGTG GCCCGACGCG
GATGCGTTCG CGTGCGAGAC AGGCGACGAA CCGTAA
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| Protein sequence | MIRIGTLHVF PDRREIRANG ELLRIGSRAF EILELLIQAN GALVSKDEIM QRVWPHTFVE
ENNLQVHIAS LRKALGQDRD LIVTVPGRGY RLVSAPAEGA AAVRSATSWL APAPTALVGR
EQMVADVLAA LDASRVVTLV GAGGIGKTRV AVEAALRAEA RFPDGTAFVS LATVACPQFV
PAALADALDL ALPARSLTLE AVLASVAHRR MLLVLDNCEH LLDAAARIAA VLTESDTGLR
VLATSREALR IHGERQCPVP PLEIGDEGAD AADMLGASAV QLFAARACAA DPRFPLDERS
VSLMASVCRH LDGLPLAIEL AAARAAVLGI DVLADHLDDH FRLLTGGFRT ALPRHRTLQA
MYDWSYRLLA DAERVLLRWL GVFRDGFSIE AVRDIVGTKG LADADLLDTI AGLVSKSLVN
VENAHGVPRY RLLTTTRAYA LQQLENNGEC AAAALAHANY FLTLFTLAPD GGDGSPAEAR
RDQVRRELGN LRAALDWAFS PDGHAETGIA LAAVAVPCLL DLSLVDECRE RARVALDAMR
DLDATPARDD ARKRLLAAYA AALAQGSGST RGVRDAWPDA DAFACETGDE P
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