| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5528 |
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| Symbol | |
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| ID | 6181983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 17315 |
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| End bp | 21133 |
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| Gene Length | 3819 bp |
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| Protein Length | 1272 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641688660 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001815524 |
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| Protein GI | 172064812 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTG CGACCTCGCC GACCACGCTT AGCGAATTGC TTCAGAACCG GGCCGCCACA
CTCGGCGACA AAACCGCCTA CGTGTTCCTG AGCGGCCCGC CCGAACAGGA ACAGGCCGAA
TCGATGACCT TCGCGGAACT CGACGCACGC GCTCGCCGGG TCGCCGCGCT GCTGCAGCAG
AACGCGATCG ACATCGGCGA CCGGGTGCTG CTGCTGTGCC GGCCGGGGCT CGACTATGTC
AGCGCCTTCA TGGGGTGCCT GTATGCGGGC GCCATCGCAG TTCCTGCCTA CCCGCCGCGC
AACAGGCAGC ATATGGTGCG GATCGCCGGC ATCGTCGAGA ACGCAGGCGC GAACACGATT
CTGTGTTCGG CCGAGGACCA TGCGCGCTGC GCGACCTGGC TCGCCGATAC CGACGCATCC
GGCAGCACGC TGCTCGACGT CGGAGGCGCG CAGGCGCTGG ATCCCGTGCC TTCGCCCGCC
AGCGTGCAGC CATCCCGAAT CGCCTTTCTG CAATACACGT CGGGAACCAC TGGTAGCCCC
AAGGGCGTGA TGGTGTCGCA CGGCAACCTG ATGCATAACC TGGGGCTGAT GCGCGAATGG
CTCGCCTACG ACGAGCAGAG CACGATCGTC AGCTGGCTGC CGCCATACCA CGACATGGGC
CTGATCGGCG TGATCCTGAC GTCGCTCTAC GGCGGCTTCC GGAGCGTGCT GATGGCCCCG
GAACGCTTCA TCCAGCATCC GTACCTGTGG TTGCGTGCGA TCAGCCAGTA CCGTGCGGAT
CTGACGGGCG CTCCGGATTT CGCATACCGG ATGTGCTGCC GGCGGATCTC CGACGAACAG
CTGGCGACGC TCGACCTGTC GTGCGTGCGG GTCGCCTATA ACGGCGCCGA GTCGGTGCGC
GCCAGCACCT TGACTGATTT TGCGCAGCGC TTCGCCGCCG CAGGCTTCCC TGCCGACGGC
TTTCTGCCGT GCTACGGGCT GGCGGAGGGA ACGCTGTACG TCGCCGGTCG CGCGAAGCAG
CATCCGATCC GGACGCTATG CGTCGACCAG GCTGCGCTCC AGCGGCAATC CGTGGTGCTG
CGCCGCGAAT TCCTGGGCGT GTCGCCGCAG CCGCTGGATC GTCCGGGCGA ACGGGTCCTG
GTCAGCGTGG GTCGCACTGA CGGCGAACAA CACGTGATCG TGCGCGACCT GGAGACGAAC
GAGCGTTGCG CCGATCGGAC CATCGGCGAA ATCTGCGTGG CCGGCCCGAG CGTCGCCGCC
GGCTACTGGC ATCTGGACGA GCAGACGCAT TCGACCTTCC AGCACAGTCT GGCGGGCCAT
CGGGATCAGG TGTTCATGCG CACCGGCGAT CTCGGCTTCA TTCTGGGCGA CGAGCTTTAC
GTCACCGGCC GGCTCAAGGA CATGGTGATC CTGGCCGGCC GCAACTACTA CTCGGAAGAC
ATCGAGTACG CGCTGATCGT CGGCGTGCCG GAACTCGTGC CGAACGGTTG CGCGGCCTTC
ATGGACGACC AGGTCGACGC GGAGCGCCTG ATCGTCGTGG CGGAAGTCGA GCGCACGCAG
CGCAAGGGCA ATCTCGACAG CTTCATCGAC GCGATTCGCC AGGCTATCTG GAACCGCCTC
GACATCGGCC CGAGCGCGAT CGTGCTGGTG TCGCCCGGCA GCGTGCCGAA AACGTCGAGC
GGCAAGGTGC GCCGCAGCAC GTGCCGCACG CAGCTGCACG ACGGCGCGCT GACGATCCTC
GCGCAGTGGG ACGTCGAGGG CGGTGTACAT ACGCCCGCGC CCGATCGCCG GCAGCCCGCA
CGCCCGACAG CTGTTGCCGA CCAGCCGGCG GCCAACGATC GCCGGCGTGA TGAAAGCACC
ACCGTCGACG AACTGAACGA CTGGCTCAGG CACTACGCGC GCACGCGGAT CGATTCGCGA
ACCATGGACG AGCGTCGCAC CATTCCGCCG CACGTCGTGC TCGATTTCGG GAATCGGGGC
CTGCTCGGCA TGCCGATCGA CCGTTCGCAT GGCGGCCTCG GCCTCGGCCA GCGCGACATG
TTGCGCGTGT TCGCGCAGCT GGCCGCGATC GATTCGACGC TGGCTTTCTT TGTCGCCCTG
AACAACACGC TCGGGATCCT GCCGATCATG CAGCATGCGC AGCCACCATT GCGCGAGGAA
TTGCTGCCGA GCCTCGCGAG CGGTCGGATG CTCGCCGCAT TCGCGATCAC GGAGCCGGCC
GCGGGCTCGC ATGTGCGCGC GATTGCCTCC CGCGCACAGC GCACCGGGTC CGGCGACTGG
CTGGTCACGG GGAACAAGCG CTGGAGCGGC TCATCCGCCT GGGCGGGAAT CATCAACGTG
TTCGCGAGGC AGGCCGACGG CACCGGAATG GTCGGATTGG CGGTGCGCCC CGGCACGCCA
GGCGTGCGGA TCGGTGCCGA GGAGCTGACG ATGGGCGTGC GCGGCATGAT CCAGAATTCG
CTCCATCTGG ATCGGGCACG AATCAGCGAC GCATACCGGC TCGGCGACAT CGGCCAGGGG
ATGCTCGTGG CGCAGCACGC GATGAACATT GCGCGCCTTG GCATCGCTGC CGTCTGCGTG
GGCGGAATGA AGCGCTGTGC GCAGCTGATG CATCGCTACG GAGGGCGGCG CCAGGTCGGC
ACCGGCCTCC TGCTGGACAA CCCGCTGAGC CGCCTGCGCC TGGGCGAGCT GCGTGACCGC
ATCGACGGGC TCAATGCGCT GGTCGAGCAC CTGGCCACGG AACTGGACCT CGGCGTCGCG
CTGCCTGAAG ACTGTCTCCT GATTTCGAAG ATTCTCGGCT CCGAGCTGCT GTCGCAATCC
GCTGACGAGA TGATGCAGTT CCTGGGTGGC CGCGGTTATA TCGAGACCAA CCTGGCGCCG
CAGATCTTCC GGGACGCGCG CCTGACCCGC ATTTTCGAGG GGCCGACCGA AACGCTGCTG
GTTCACCTGG GCAGTCGTCT GCTCAACGGG AGCGACGATT TGCTGCGCTA TCTGGAGAGT
GCGCTGAGCG CCGGTGCGCT GGCCAGGGAG CTGCGCGAAC TGGGCGCACA GCTGGCGCAA
GACGGGCTCG CCAATGCGTC GAAACTCGAC GGCACCGCGC ACGCTGCCGT CTGGGCCAAT
TATTGGCTCG GCACGATCGC GCAATGGGGA TTGCTGCTGG CGGTGACCGA ACGCGCGGCT
GCGCAGCAGC GCATCGGCGA CGGCACGCTG CGCTGGGCGC AGAGCCAGTA CGAACTCGCG
ATCGAGGCGG CGCAACGGCA GGTCGGCTTG CGATCTGCGT TGTCCACGAC CGTGGAACTG
AACGAGTGGG CAGCGCGCAT CGGGTTCGAG ATCGGCTCGA TCGAGCAAAC GATCCCGGGC
GCAAGCCAAC TCGTCGATCC GTTGCTGGAC GCCAATGCCG ACCCGCGTTC GGTCTCCCGC
GCGCCCGACG CGCCAGCCGG CGAAGACGCC GGTTCGGCCG CAACCCCGAT CGTGAGTGAG
CCGGCAAGCC TGCTCGATCG CCAGCAGATT CATGCCGTCG AACAATGGCT CATCGCGTGG
CTGGGCGAGC GCCTCAAGCA CCGCAAGATT CGATTGACGC GCGAGTCGAC GTTCGCCGAA
ATCGGCTTCG ACTCGATCCT CGCCGTCGAA ATGACGATCG TTTTCAGCGA GACGTTCAGC
GTGACCGTCG ATCCGTCCGC GGTCTGGGAC TACCCGTCCA TTCGCGCGCT GGCCGCCCAT
CTCGCGCCCC GGACTCACGG CGCCGCGCCG GCCGTTGCCG TAGCGCACGC CGATTCGGAT
GCATCTTCAT CCATTGCAGC CCAACCTTCG ACCCTGTGA
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| Protein sequence | MTTATSPTTL SELLQNRAAT LGDKTAYVFL SGPPEQEQAE SMTFAELDAR ARRVAALLQQ
NAIDIGDRVL LLCRPGLDYV SAFMGCLYAG AIAVPAYPPR NRQHMVRIAG IVENAGANTI
LCSAEDHARC ATWLADTDAS GSTLLDVGGA QALDPVPSPA SVQPSRIAFL QYTSGTTGSP
KGVMVSHGNL MHNLGLMREW LAYDEQSTIV SWLPPYHDMG LIGVILTSLY GGFRSVLMAP
ERFIQHPYLW LRAISQYRAD LTGAPDFAYR MCCRRISDEQ LATLDLSCVR VAYNGAESVR
ASTLTDFAQR FAAAGFPADG FLPCYGLAEG TLYVAGRAKQ HPIRTLCVDQ AALQRQSVVL
RREFLGVSPQ PLDRPGERVL VSVGRTDGEQ HVIVRDLETN ERCADRTIGE ICVAGPSVAA
GYWHLDEQTH STFQHSLAGH RDQVFMRTGD LGFILGDELY VTGRLKDMVI LAGRNYYSED
IEYALIVGVP ELVPNGCAAF MDDQVDAERL IVVAEVERTQ RKGNLDSFID AIRQAIWNRL
DIGPSAIVLV SPGSVPKTSS GKVRRSTCRT QLHDGALTIL AQWDVEGGVH TPAPDRRQPA
RPTAVADQPA ANDRRRDEST TVDELNDWLR HYARTRIDSR TMDERRTIPP HVVLDFGNRG
LLGMPIDRSH GGLGLGQRDM LRVFAQLAAI DSTLAFFVAL NNTLGILPIM QHAQPPLREE
LLPSLASGRM LAAFAITEPA AGSHVRAIAS RAQRTGSGDW LVTGNKRWSG SSAWAGIINV
FARQADGTGM VGLAVRPGTP GVRIGAEELT MGVRGMIQNS LHLDRARISD AYRLGDIGQG
MLVAQHAMNI ARLGIAAVCV GGMKRCAQLM HRYGGRRQVG TGLLLDNPLS RLRLGELRDR
IDGLNALVEH LATELDLGVA LPEDCLLISK ILGSELLSQS ADEMMQFLGG RGYIETNLAP
QIFRDARLTR IFEGPTETLL VHLGSRLLNG SDDLLRYLES ALSAGALARE LRELGAQLAQ
DGLANASKLD GTAHAAVWAN YWLGTIAQWG LLLAVTERAA AQQRIGDGTL RWAQSQYELA
IEAAQRQVGL RSALSTTVEL NEWAARIGFE IGSIEQTIPG ASQLVDPLLD ANADPRSVSR
APDAPAGEDA GSAATPIVSE PASLLDRQQI HAVEQWLIAW LGERLKHRKI RLTRESTFAE
IGFDSILAVE MTIVFSETFS VTVDPSAVWD YPSIRALAAH LAPRTHGAAP AVAVAHADSD
ASSSIAAQPS TL
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