| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5498 |
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| Symbol | |
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| ID | 6181343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2749840 |
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| End bp | 2750484 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641685253 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001812158 |
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| Protein GI | 172064507 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00509748 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGCCC CCGACACTGA CCGGCCCGCC GCCCGACTGC TGCTCGTCGA CGATCACCCG
CTGGTGCGCG ACGGCCTGCG GATGCGGCTC GAGGCGGCCG ACCTGTCCGT GGTCGGCGAA
GCCGGCAACG CCGACGAAGC GCTCGCGCTC GCCGCGTCGC TCGAGCCCGA TCTCGCGCTG
ATGGACGTCG GCATGAACGG GATGAACGGC ATCACGCTCG CCGGCGTGTT CCACGAGCGC
TTTCCGGGGA TTCGCGTGCT GATGCTGTCG ATGCACGACA ACATCGAGTA CGTGACGCAG
GCCGTGCGCG CCGGCGCGAG CGGCTACCTG CTGAAGGATT CGCCGGCGAG CGAGATCGTC
CGCGCGATCG GCGCGGTGCT GGCGGGGCAG ACGTTCTTCA GCGAAGGGCT CGCCGCGCGG
ATGATCCAGG CGAGCGCGGC CGCGTCGCCG CTCGACCGCT TGACGCCGCG CGAACGCGAC
ATCCTCGACG CGCTGGCCGA GGGGCTGTCG AGCAAGCAGA TTGCCCAGCA GACGGGGCTG
TCGGTCCGCA CGGTGGAAAC CCATCGGCTG AATTTGAAGC GCAAGCTCGA GATCGAGGGG
CAGGCGGAGC TGATCAAGTT CGCGGTCGAG CATCGGCGGC GATAG
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| Protein sequence | MSAPDTDRPA ARLLLVDDHP LVRDGLRMRL EAADLSVVGE AGNADEALAL AASLEPDLAL
MDVGMNGMNG ITLAGVFHER FPGIRVLMLS MHDNIEYVTQ AVRAGASGYL LKDSPASEIV
RAIGAVLAGQ TFFSEGLAAR MIQASAAASP LDRLTPRERD ILDALAEGLS SKQIAQQTGL
SVRTVETHRL NLKRKLEIEG QAELIKFAVE HRRR
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