Gene BamMC406_5429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5429 
Symbol 
ID6179157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2671331 
End bp2671684 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content66% 
IMG OID641685184 
ProductDOPA 45-dioxygenase 
Protein accessionYP_001812089 
Protein GI172064438 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3805] Aromatic ring-cleaving dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA TCGACACCAC CGCCATCGAC AGTTGGCACG CACACGTCTA CTTCGACACC 
GCGAGTCGCG ACGCGGCCTG GGCGTTTCGC CTCGTCGTCG AAGAACGGTT CGGCGCGATC
ATCGAGCTCG GCCGCTTTCA CGAACGCCTC GTCGGCCCGC ATCCGGCGTG GTCGTACCAG
ATCGCGTTCG ACGCCGCGCG GTTCGACACC ATCGTGCCGT GGCTCGTGCT GAATCACGGC
GCGCTCGACA TCTTCCTGCA TCCGAACACG AACGACGAAT TGCGCGACCA CCGCGACAGC
GCGGTGTGGA TCGGCAAGTC GCACGAACTG AATCTCGGCG CGCTGGGGCG CTGA
 
Protein sequence
MSAIDTTAID SWHAHVYFDT ASRDAAWAFR LVVEERFGAI IELGRFHERL VGPHPAWSYQ 
IAFDAARFDT IVPWLVLNHG ALDIFLHPNT NDELRDHRDS AVWIGKSHEL NLGALGR