Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5424 |
Symbol | |
ID | 6180160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2668003 |
End bp | 2669163 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641685179 |
Product | hopanoid biosynthesis associated radical SAM protein HpnH |
Protein accession | YP_001812084 |
Protein GI | 172064433 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.795895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTATTC CGCTGCTCCA GCAAGTCCGC GTCGGCGCAT ACATCATGCG CCAACACCTG TCCGGCAACA AACGCTATCC GCTCGCGCTG ATGCTCGAGC CGCTGTTCCG CTGCAACCTC GCGTGCAACG GCTGCGGCAA GATCGACTAT CCGGACCCGA TCCTGAACCA GCGCCTGTCC GTCGAGGAAT GCCTGGGAGC CGTCGACGAG TGCGGCGCGC CCATCGTGTC GATCGCCGGC GGCGAGCCGC TGCTCCACAA GGAGATGCCG GAGATCGTCA AGGGCATCAT GAAGCGCAAG AAATTCGTGT ACCTGTGCAC GAACGCGCTC CTGATGGAAA AGAAGATGGA CGACTACGAG CCGAATCCGT ACTTCGTCTG GTCGGTCCAC CTCGACGGCG ACAAGGAGAT GCACGATCAC TCCGTATCGC AGGAAGGCGT GTACGACAAG GCGGTCGCGG CCATCAAGGA AGCGAAGCGC CGCGGCTTCC GCGTGAACAT CAACTGCACG CTGTTCAACG ATGCGATCCC CGAGCGCGTC GCGAAGTTCT TCGACACGCT GGGGCCGATC GGCGTCGACG GCATCACCGT GTCGCCGGGC TACGCATACG AACGCGCGCC GGATCAGCAG CACTTCCTGA ACCGCGACAA GACGAAGAAC CTGTTCCGCG AGATCCTGAA GCGCGGCGAA GGCGGCAAGC GCTGGTCGTT CAGCCAGTCG TCGCTGTTCC TCGACTTCCT GGCCGGCAAC CAGACGTACA AGTGCACGCC GTGGGGCAAC CCCGCACGCA CCGTGTTCGG CTGGCAGAAG CCGTGCTATC TGGTCGGCGA AGGTTACGTG AAGACCTTCA AGGAACTGAT GGAAGACACG AACTGGGACA ACTACGGCGT CGGCAACTAC GAGAAGTGCG CGGACTGCAT GGTCCACTGC GGCTTCGAAG CCACGGCCGT GATGGACACG ATCTCGCATC CGCTGAAGGC GCTGCGCGTG AGCAAGAAGG GCATCAAGAC GGACGGCCCG TTCGCACCGG ACATCTCGAT CGCGAAGCAG CGTCCGGCCG AGTATGTGTT CTCGCGCCAC GTCGAGATCA AGCTCGACGA AATCCAGCGC GCCGGCAAGG GCAAGCTGCA GAAGCCGGCG AAGCCGGCAA CGGCGGCTTA A
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Protein sequence | MSIPLLQQVR VGAYIMRQHL SGNKRYPLAL MLEPLFRCNL ACNGCGKIDY PDPILNQRLS VEECLGAVDE CGAPIVSIAG GEPLLHKEMP EIVKGIMKRK KFVYLCTNAL LMEKKMDDYE PNPYFVWSVH LDGDKEMHDH SVSQEGVYDK AVAAIKEAKR RGFRVNINCT LFNDAIPERV AKFFDTLGPI GVDGITVSPG YAYERAPDQQ HFLNRDKTKN LFREILKRGE GGKRWSFSQS SLFLDFLAGN QTYKCTPWGN PARTVFGWQK PCYLVGEGYV KTFKELMEDT NWDNYGVGNY EKCADCMVHC GFEATAVMDT ISHPLKALRV SKKGIKTDGP FAPDISIAKQ RPAEYVFSRH VEIKLDEIQR AGKGKLQKPA KPATAA
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