| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5422 |
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| Symbol | |
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| ID | 6179516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2665429 |
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| End bp | 2666616 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641685177 |
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| Product | hopene-associated glycosyltransferase HpnB |
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| Protein accession | YP_001812082 |
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| Protein GI | 172064431 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | [TIGR03469] hopene-associated glycosyltransferase HpnB |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTGG CGATTACCTT CCTGGTATCC GGCCTGTCGC TGCTGATCTG GATCGTGCTG
CTCGTCGCGC GCGGCGGTTT CTGGCGTGCG CGGCCCGCGC GGGCGCTGCC GCCGCAGGCG
CGCGGCGCGG CGGCCGAGGC CGGCTGGCCG GCCGTCGTCG CGGTCGTGCC GGCGCGCAAC
GAGGTCGATG TGATCGCCGA GGCGGCGACG TCGTTGCTCG AGCAGGACTA TCCGGGCGAT
TTTCACTTGA TCATCGTCGA CGACCACAGC GACGACGGCA CCGCCGACGC GGCCCGTGCG
GCCGCGCTCG CGATCAACCG CGCCGAGCGC CTGACCGTGC TGGCCGCGAA GCCGCTGCCG
TCCGGCTGGT CGGGCAAGGT ATGGGCGCAG TCGCAGGGCA TCGCGGCGGT GCGCACGCTC
GGGCTGCCGG CCGACTACCT GCTGCTGACG GATGCCGACA TCGGCCATCC GCCCGACGCC
GTCGCCCAGC TCGTCACGCG CGCGCAGGCA GAACAGCGCG ATCTCGTGTC GCTGATGGTG
CGGCTGCGCT GCGATTCGTT CTGGGAGAAG GCGCTGATCC CGGCGTTCGT GTTCTTTTTC
GCGAAGCTCT ATCCGTTCTC GTGGATCAAC AATCCGCGCA ACCGGACGGC CGGCGCCGCG
GGCGGCTGCA TGCTGGTCAA GCGCAGCGCG CTCGAGGAGG CGGGCGGCAT CGAATCGATC
CGCGGCGCGC TGATCGACGA CTGCAGCCTC GCCGCGCAGA TCAAGCATCG CGGCAGCGGC
CGGCACCCGA TCCGGCTCGA TCTGGCCGAT CGCAGCGTGT CGCTGCGTCC GTACGACAGC
TGGCGCGACA TCTGGAACAT GATCGCGCGC ACCGCGTTCA CGCAGCTCCA TTATTCGCCG
CTGCTGCTCG CCGGCACGCT GCTCGGGATG ACGATCATCT ACCTCGTGCC GCCCGTCGCC
GCGCTGGCGT ACGGCGCGCG CGCATGGCCG GCGTGGCTCG CGTGGGCGTC GATGTGCACC
GCGTATGCGC CGATGCTGCG CTACTACCGG CGCTCGCCGC TGTGGGCGCC CGCGTTGCCG
CTCGTCGCGC TGTTCTACGT CGGAGCGACG TTCGCTTCCG CGTGGCGCTA CTGGCGCGGC
AAGGGCGGCC AGTGGAAGGC GCGGGTGCAG GCGCCGGTGG AGCGTTGA
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| Protein sequence | MMLAITFLVS GLSLLIWIVL LVARGGFWRA RPARALPPQA RGAAAEAGWP AVVAVVPARN
EVDVIAEAAT SLLEQDYPGD FHLIIVDDHS DDGTADAARA AALAINRAER LTVLAAKPLP
SGWSGKVWAQ SQGIAAVRTL GLPADYLLLT DADIGHPPDA VAQLVTRAQA EQRDLVSLMV
RLRCDSFWEK ALIPAFVFFF AKLYPFSWIN NPRNRTAGAA GGCMLVKRSA LEEAGGIESI
RGALIDDCSL AAQIKHRGSG RHPIRLDLAD RSVSLRPYDS WRDIWNMIAR TAFTQLHYSP
LLLAGTLLGM TIIYLVPPVA ALAYGARAWP AWLAWASMCT AYAPMLRYYR RSPLWAPALP
LVALFYVGAT FASAWRYWRG KGGQWKARVQ APVER
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