Gene BamMC406_5417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5417 
Symbol 
ID6179471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2659852 
End bp2660979 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content72% 
IMG OID641685172 
Producthypothetical protein 
Protein accessionYP_001812077 
Protein GI172064426 
COG category[S] Function unknown 
COG ID[COG4645] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGA GCATGCCGCC CGCCGCCGCC GCGGCTGCGC CGGCGCGCGG CGCCCGCCTG 
ATCGAAGTCG ATTTCTTCCG CGGGATCGTG CTGTTGATGA TCGTCGTCGA TCACATCAGT
GCGAGCGTGC TGTCGCGCGT GACGCTCCAC GCGTTCGCGC TGTGCGACGC GGCCGAGGTG
TTCGTGTTTC TCGGCGGTTT CGCGACCGCG AGCGCCTACG GCGCGATCGC CGACCGGCAC
GGCGCGCGCG CCGCGCAGCG GCGGTTCGTG CACCGCGCGA TGCAGATCTA TCGCGCGTTT
CTCGCGACGT CGACGCTGAT GCTCGTCGTG TCCGCCGTGC TCGACCATTA CGGGCTCGAC
GCGCCGAACC TCGCGCTCGA CGACGTCAGC GTGATGCTCG CGTCGCCGCT CACCGGCGCG
GCCGAGCTGC TCACGTTCCA GCGCCAGCCG TATCTCGCGT CGGTGCTGCC AATGTACGTA
CTGTTCGCGC TCGCGTCGCC GGTCGTCGTG CCGTTCGCGC GCCGCCACCC GTGGCTGCTC
GTCGCGTTCA GCGCGGCGTC GTGGCTCGCG GCCGGCTGGC TCGGCCCCGA ACTGCTGGAC
ACCGATTCGT TCCGCTGGAG CTTCAACCCG TTCGCGTGGC AGCTGATGTT CGTCGGCGGC
GTGCTCGCGC GCCGCCAGCC GTTCTACCGG CACGTCGCGC TCGGGCGGTG GAGCGCCGCG
GCGACCGGCG TCGCGTGTGC GATCGTGCTC GGCTGCGCGA GCTACAAGCT GTTCTCGGGG
CTGCCGGTGC CGGAAGGCGT GCTCAAGCGC GATCTCGCGC TGCCGCGCAT CGTGAGCTTC
GCGGCGCTCG CATGGCTGAT GGCCGACTGC GTGCGCTACG GCTGGATCGC GCGCATTGCG
CACGCCGTGC AGCCGGTCGT CGCGGTCGGC CGGCGCGGCC TGATCTGCTT CGTCGCGGGC
GCGGCGATCT CGCTCGTCAT CGATTCGCTG CTGCATCCGG TCGCGAACGG CGCCGAGCTG
CGGCATATCG GCGTGGGCCT CGCGGCCGAC GCGTGCGCGG TCGGGCTGAT GATGGCCGTG
GCCGGATCGG GATCGTGGTT CGCGCGCTGG CGCGGCGCGG CCGCATGA
 
Protein sequence
MSLSMPPAAA AAAPARGARL IEVDFFRGIV LLMIVVDHIS ASVLSRVTLH AFALCDAAEV 
FVFLGGFATA SAYGAIADRH GARAAQRRFV HRAMQIYRAF LATSTLMLVV SAVLDHYGLD
APNLALDDVS VMLASPLTGA AELLTFQRQP YLASVLPMYV LFALASPVVV PFARRHPWLL
VAFSAASWLA AGWLGPELLD TDSFRWSFNP FAWQLMFVGG VLARRQPFYR HVALGRWSAA
ATGVACAIVL GCASYKLFSG LPVPEGVLKR DLALPRIVSF AALAWLMADC VRYGWIARIA
HAVQPVVAVG RRGLICFVAG AAISLVIDSL LHPVANGAEL RHIGVGLAAD ACAVGLMMAV
AGSGSWFARW RGAAA