Gene BamMC406_5397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5397 
Symbol 
ID6180189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2637389 
End bp2637685 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content62% 
IMG OID641685152 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_001812057 
Protein GI172064406 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.48701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.976542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCT ACAGGCAACT GACTGCGCAG CTCGAAAAAC TTCAGCAAAA GATCGACAAG 
GAACGCGAAA AGGCGATTGC CGATGCGATT GCCGCCATTC GGGCGAAAAT CGAGGAGTTC
GACATTACGG CGGAGGAGCT CGGTTTTCTT CCGATGGGCG CCGCCGCTGC CGCGAAGCCG
AAGCGTCCGT TGCCGCCGAA GTACCTGAAC CCGAAGACGG GCGAAACGTG GAGCGGCCGC
GGGCGTGCGC CGGCGTGGCT CGGCAAGAAC CGCGCGCGTT TCCTGATCAA GGACTGA
 
Protein sequence
MATYRQLTAQ LEKLQQKIDK EREKAIADAI AAIRAKIEEF DITAEELGFL PMGAAAAAKP 
KRPLPPKYLN PKTGETWSGR GRAPAWLGKN RARFLIKD