| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5386 |
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| Symbol | |
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| ID | 6181176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2621103 |
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| End bp | 2622293 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641685141 |
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| Product | AcnD-accessory protein PrpF |
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| Protein accession | YP_001812046 |
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| Protein GI | 172064395 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCACA TTCCGCAAAT CAGGATTCCG GCGACCTACA TCCGCGGCGG CACCAGCAAG
GGCGTGTTCT TTCGGCTGCA GGACCTGCCG GATGCCGCGC AGACGCCGGG CGCCGCGCGC
GACGCGCTGC TGCTGCGCGT GATCGGCAGC CCCGATCCGT ACGGCAAGCA GATCGACGGG
ATGGGCGGCG CGACGTCGTC CACCAGCAAG ACGGTGATCG TGTCGAAGAG CATGCGGCCC
GGTCACGACG TCGACTACCT GTTCGGGCAG GTCGCGATCG ACAAGGCGTT CGTCGACTGG
ACCGGCAACT GCGGCAACCT GTCGGCGGCG GTCGGCCCGT TCGCGATCGG CGGTGGCCTC
GTCGATGCAT CGCGCGTGCC GCGCGACGGC GTCGCGACCG TGCGGATCTG GCAGGCGAAC
ATCGGCAAGA CGATCGTCGC GCACGTGCCG ATCACGAACG GCGCGGTGCA GGAGACGGGC
GACTTCGAGC TGGACGGCGT CACGTTCCCG GCCGCCGAAG TGCAGCTCGA GTTCATGAAC
CCGGCCGCCG AGGAAGAAGG CGCGGGCGGC TCGATGTTCC CGACCGGCAA CCTCGTCGAC
GACCTGGCCG TGCCGGGCAT CGGCACGCTG AAAGCGACGA TGATCAACGC GGGAATTCCG
ACCATCTTCG TCGAGGCCGA AGCGATCGGC TATACGGGCA CGGAGCTGCA GGACGCGATC
AATGGCGACC CGAAGGCGCT CGAGAAGTTC GAGACGATCC GCGCGCACGG CGCGCTGCGC
ATGGGCCTGA TCGACACGCT CGACGAGATC GCGACGCGCC AGCACACGCC GAAGATCGCG
TTCGTCGCGA AGCCGGCCGA CTATGTCGCG TCGAGCGGCA AGCGCGTGAA TGCGGGCGAC
GTCGACCTGC TGGTGCGGGC GATGTCGATG GGCAAGCTGC ACCACGCGAT GATGGGCACG
GCGGCGGTCG CGATCGGCAC GGCCGCGGCG ATTCCCGGCA CGCTGGTGAA TCTCGCGGCG
GGCGGCGGTG CGCGCAACGC GGTGCGCTTC GGGCATCCGT CGGGCACGCT GCGCGTCGGC
GCGGAAGCGC AGCTCGAGAA CGGCGAGTGG ACCGTCACGA AGGCGATCAT GAGCCGCAGC
GCGCGCGTGC TGATGGAGGG GTGGGTGCGG GTGCCGGGTG ATGCGTTCTG A
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| Protein sequence | MAHIPQIRIP ATYIRGGTSK GVFFRLQDLP DAAQTPGAAR DALLLRVIGS PDPYGKQIDG
MGGATSSTSK TVIVSKSMRP GHDVDYLFGQ VAIDKAFVDW TGNCGNLSAA VGPFAIGGGL
VDASRVPRDG VATVRIWQAN IGKTIVAHVP ITNGAVQETG DFELDGVTFP AAEVQLEFMN
PAAEEEGAGG SMFPTGNLVD DLAVPGIGTL KATMINAGIP TIFVEAEAIG YTGTELQDAI
NGDPKALEKF ETIRAHGALR MGLIDTLDEI ATRQHTPKIA FVAKPADYVA SSGKRVNAGD
VDLLVRAMSM GKLHHAMMGT AAVAIGTAAA IPGTLVNLAA GGGARNAVRF GHPSGTLRVG
AEAQLENGEW TVTKAIMSRS ARVLMEGWVR VPGDAF
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