Gene BamMC406_5339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5339 
Symbol 
ID6181153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2561409 
End bp2562611 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content64% 
IMG OID641685094 
Producttrans-2-enoyl-CoA reductase 
Protein accessionYP_001811999 
Protein GI172064348 
COG category[S] Function unknown 
COG ID[COG3007] Uncharacterized paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.254325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCA AACCGCGCGT GCGTGGCTTC ATCTGCGTGA CGACTCATCC GGTCGGCTGC 
GAAGCCAACG TCAAGGAACA GATCGACTAC GTGACTTCGC ATGGCCCGAT CGCCAACGGC
CCGAAGAAGG TGCTCGTGAT CGGCGCGTCG ACCGGCTACG GCCTCGCCGC CCGGATCTCG
GCCGCATTCG GCTCGGGCGC GGACACGCTG GGCGTGTTCT TCGAGCGCGC CGGCGGCGAA
ACGAAGCCGG GCACCGCCGG CTGGTACAAC AGCGCCGCGT TCGAGAAATT CGCCGCCGAA
AAGGGGCGCT ATGCGCGCAG CATCAACGGC GACGCATTCT CCGACAAGGT GAAGCAGGTC
ACGATCGACA CCATCAAGCA GGATCTCGGC AAGGTCGACC TGGTCGTATA CAGCCTCGCG
GCACCGCGCC GCACGCATCC GAAGACGGGC GAAACGATCA GCTCGACGCT GAAGCCGGTT
GGCAAAGCAG TTACGTTCCG CGGCCTCGAC ACCGACAAGG AAGTGATCCG CGAAGTCTCG
CTCGAGCCGG CGACGCAGGA AGAGATCGAC GGCACCGTCG CCGTGATGGG CGGCGAGGAC
TGGCAGATGT GGATCGACGC GCTCGATGAG GCCGGCGTGC TGGCCGACGG CGCGAAGACG
ACCGCGTTCA CGTATCTCGG CGAACAGATC ACGCACGACA TCTACTGGAA CGGCTCGATC
GGCGAAGCGA AGAAGGATCT CGACAAGAAG GTGCTGTCGA TCCGCGACAA GCTCGCCGCG
CACGGCGGCG ATGCGCGCGT GTCGGTGCTG AAGGCCGTCG TCACGCAGGC GAGCTCGGCG
ATTCCGATGA TGCCGCTCTA CCTGTCGTTG CTGTTCAAGG TGATGAAGGA ACAGGGCACG
CACGAAGGCT GCATCGAGCA GGTGTACGGG CTCCTGAAGG ACAGCCTGTA CGGCGCGACG
CCGCACGTCG ACGAAGAAGG CCGTCTGCGC GCGGACTACA AGGAGCTCGA TCCGCAAGTG
CAGGGCAAGG TCGTCGCGAT GTGGGACAAG GTCACGAACG AGAACCTGTA CGAGATGACC
GACTTCGCCG GCTACAAGAC CGAATTCCTG CGTCTGTTCG GCTTCGAGAT CGCCGGCGTC
GACTACGACG CGGACGTGAA CCCGGACGTG AAGATCCCCG GCATCATCGA CACCACGGTC
TGA
 
Protein sequence
MIIKPRVRGF ICVTTHPVGC EANVKEQIDY VTSHGPIANG PKKVLVIGAS TGYGLAARIS 
AAFGSGADTL GVFFERAGGE TKPGTAGWYN SAAFEKFAAE KGRYARSING DAFSDKVKQV
TIDTIKQDLG KVDLVVYSLA APRRTHPKTG ETISSTLKPV GKAVTFRGLD TDKEVIREVS
LEPATQEEID GTVAVMGGED WQMWIDALDE AGVLADGAKT TAFTYLGEQI THDIYWNGSI
GEAKKDLDKK VLSIRDKLAA HGGDARVSVL KAVVTQASSA IPMMPLYLSL LFKVMKEQGT
HEGCIEQVYG LLKDSLYGAT PHVDEEGRLR ADYKELDPQV QGKVVAMWDK VTNENLYEMT
DFAGYKTEFL RLFGFEIAGV DYDADVNPDV KIPGIIDTTV