Gene BamMC406_5303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5303 
Symbol 
ID6180297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand+ 
Start bp2523713 
End bp2524345 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content67% 
IMG OID641685058 
ProductTetR family transcriptional regulator 
Protein accessionYP_001811963 
Protein GI172064312 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.444335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC GCCGCAACGC CCCGATCGCC TCGCGCAAGC AGCCCAAGCA GGCCCGCTCG 
ACCCGTCTCG TCGACGACGT GCTGCAGGCC GCTATTCAGG TTTTGGCGAC CGAAGGGGCG 
CAGCGCTTCA CGATGGCGCG CGTGGCCGAG CGCGCCGGCG TGAGTGTCGG CTCGCTGTAC 
CAGTACTTCC CGAACAAGGC GGCCGTGCTG TTCCGGCTCC AGCACGACGA ATGGCGGCAA 
ACCTCCGAGA TGCTGTGCGG GATGCTTCAG GATAGGCGCC AGACGCCGCC CGAGCGGCTG 
CGTACGGCCG TCCACGCGTT CATCCGTTCG GAATGCGACG AGGCGTCGAT GCGCATCGCA 
CTCGACGACG CCGCGCCCCT CTATCGCGAC GCCCCCGAGG CGCGGGAAGT GAAGGCCGAA 
GGCAACCGGG TCTTCAGCGC ATTCATGCGC GAAATGCTGC CCGACGTGCC CGACGCCACG 
CATGCGCTCG CGTGCGAGCT GGTCATGACG ACGCTCACGA CGGGCGGCAA GGCGTTCTCC 
GAAACGGAAC GCACGCCTGA GGAAATCGAT GCCTATTCGA ACGCGATGGC CGACATGTTC 
TGTGTGTACC TCGCGCATCT CGCGCGGGGT TGA
 
Protein sequence
MTDRRNAPIA SRKQPKQARS TRLVDDVLQA AIQVLATEGA QRFTMARVAE RAGVSVGSLY 
QYFPNKAAVL FRLQHDEWRQ TSEMLCGMLQ DRRQTPPERL RTAVHAFIRS ECDEASMRIA 
LDDAAPLYRD APEAREVKAE GNRVFSAFMR EMLPDVPDAT HALACELVMT TLTTGGKAFS 
ETERTPEEID AYSNAMADMF CVYLAHLARG