| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5270 |
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| Symbol | |
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| ID | 6180851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2485069 |
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| End bp | 2485857 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641685025 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001811930 |
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| Protein GI | 172064279 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC TTCCGACAGT CCTCATCACC GGCGCCTCCA GCGGCATCGG TGCCACCTAC
GCCGAGCGCT TCGCCCGGCG TGGCCATGAC CTCGTCCTCG TCGCCCGTGA CAAGGCGCGA
CTCGATGCGT TGGCAGCGCG CCTGCGTGAG GAAAGCGGCG TGGCCGTGGA AGTGCTGCAG
GGCGACCTGA CCCAGTCTGC CGATCTGTCC GCGCTCGAGG CCCGTCTGCG CGATGACAAT
CGAATAGGAA TTCTGATCAA CAATGCCGGC GTGGCTCAGT CGGGCGGCTT CCTGCAGCAA
ACCTCTGAAA GCGTCGAACG CCTGATCACG CTCAACACGA CGGCGCTGAC GAGGCTTGCA
GCCGCGGTCG CGCCACGCTT TGTGCAGTCC GGTAATGGCT CGATCGTCAA CATTGGCTCG
GTGGTGGGTT TCGCGCCCGA GTTCGGCATG TCGATCTACG GCGCGACCAA GGCATTCGTG
CTGTTCCTGT CGCAGGGCCT GAATCTCGAG TTGTCACCCA AGGGGGTTTA CGTGCAAGCC
GTCCTGCCGG CGGCGACGCG CACGGAGATC TGGGAGCGCG CCGGGGTCGA CGTGAACACG
CTGCCCGAGG TGATGGAAGT GGGCGAGCTG GTTGATGCGG CACTGATCGG GTTCGACCGT
CGCGAACTGG TCACGATCCC GCCGCTGCAC GTAGCCGGGC GGTGGGACGC GCTGGATGGC
GCTCGCCAGG GACTGTTGTC GGACATTCGA CAGGCACACG CGGCCGAGCG TTATCAGCTT
CGCGCCTGA
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| Protein sequence | MTTLPTVLIT GASSGIGATY AERFARRGHD LVLVARDKAR LDALAARLRE ESGVAVEVLQ
GDLTQSADLS ALEARLRDDN RIGILINNAG VAQSGGFLQQ TSESVERLIT LNTTALTRLA
AAVAPRFVQS GNGSIVNIGS VVGFAPEFGM SIYGATKAFV LFLSQGLNLE LSPKGVYVQA
VLPAATRTEI WERAGVDVNT LPEVMEVGEL VDAALIGFDR RELVTIPPLH VAGRWDALDG
ARQGLLSDIR QAHAAERYQL RA
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