| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5255 |
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| Symbol | |
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| ID | 6179300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2464306 |
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| End bp | 2465085 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641685011 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001811916 |
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| Protein GI | 172064265 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGCAGA TGAAGCAAAG CGACGCGAGC CGCGTTGCAG TGGTTACAGG TGGCGCGATG
GGCATCGGGG CCGATTCGGC GGAACAGCTC GCGAAACGTG GCTATCACGT TGTTCTTGCC
GATATCAATA AGAGCGCGGC TGAAGAGGCG GCGTCGAGAT TTCAGCGCGC GGGCCTGTCA
GTGTCGGCCA TTGAGATGGA CGTTTCAAAT TCAGAGTCGA TTGCCGCTGC GTTCGGTGAA
CTTGACAAAA GACATGGGCG TTGCGACGTG TTGGTCAACG GCGCCGGTAT TGCGAAGCTG
GTGCCGTTCA TCGACTACCC ACTGGACACG TTTCTTAAAA CGATGCAGGT CAATGTAACG
GGGGCGTTCT TATGCTCCCA GCACGCCGCA CGTCTGATGG TAAAGAATCG CTGGGGCCGC
ATAATCAATA TCGCCTCGGT GGCAGGCATG CGAGCGGTCG GTAAAGGCCG CACGGCATAC
GGCACCTCGA AAGGGGCCGT TATTGCTTTA ACCCGCCAGA TGGCAGTGGA GCTCTGCGAT
TACGGCATTA CAGCTAACGC AATCGCGCCA GGCCCAGTCG ATACGCCGAT GACCAAGGCG
CTGCATAGTG AAGAGTTCCG CGCCGAATAT TCAAATGCGA TTCCTATGAA GCGCTACGGC
ACGACGTCGG AAATCGCTGC GGCGGTGTGC TATCTGGCGT CGGAGGAGGC GGGGTATACG
AACGGAATTG TGCTTCCGGT GGACGGCGGA TTCCTTGCGT GGGGAGCGGG TGCGGTTTGA
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| Protein sequence | MEQMKQSDAS RVAVVTGGAM GIGADSAEQL AKRGYHVVLA DINKSAAEEA ASRFQRAGLS
VSAIEMDVSN SESIAAAFGE LDKRHGRCDV LVNGAGIAKL VPFIDYPLDT FLKTMQVNVT
GAFLCSQHAA RLMVKNRWGR IINIASVAGM RAVGKGRTAY GTSKGAVIAL TRQMAVELCD
YGITANAIAP GPVDTPMTKA LHSEEFRAEY SNAIPMKRYG TTSEIAAAVC YLASEEAGYT
NGIVLPVDGG FLAWGAGAV
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