| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5247 |
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| Symbol | |
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| ID | 6179734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2454776 |
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| End bp | 2455564 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641685003 |
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| Product | IclR family transcriptional regulator |
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| Protein accession | YP_001811908 |
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| Protein GI | 172064257 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCG AAGACATCCA GACGAAACCC GGCGACTCCT ATGTGCAGTC GTTCGCGCGC
GGCCTCGCGG TGATCCGCGC GTTCGACGCC CAGCGCCCGG AGCAGACGCT CACCGAGGTC
GCCTCGGCCA CCGGGCTGAC CCGCGCGGGC GCGCGCCGGA TCCTGCTGAC GCTGCAGACG
CTCGGCTACG TCGAGGCCGA CGGCCGGCTG TTCCGGCTCA CGCCGAAGAT CCTCGAGCTC
GGCTTCGCGT ATCTCACGTC GATGCCGTTC TGGAATCTCG CCGATCCGGT GATGGAGCAA
TTGTCCGCGC AGATCCACGA AAGCTGCTCG GCGGCCGTGC TCGACCGCAC CGAGATCGTC
TACGTGCTGC GCGTGCCGAC CCGCAAGATC ATGACGATCA ACCTGTCGAT CGGCAGCCGC
TTGCCCGCGT ACTGCACGTC GATGGGCCGC GTGCTGCTGT CCGCGCTCGA CGACGCGGCG
CTCGACGAAA CGCTCGCGCA GAGCAGCATC CGCGCACACA CGCCCCGCAC GATCACCGAC
ATCGGCGAGC TGAAGGCGAC GATCGCGCAG GTGCGCCAGC AAGGCTGGGC CGTGGTCGAT
CAGGAACTCG AAGTGGGCCT GATGTCGATT TCCGCGCCGA TCCGCAACCG GCGCGGGCAG
GTGATCGCCG CGATGAACAT CAGCGGCAAC GCGCAGCGGC ATACCGCGAA GCAGATGGTG
AAGGAGTTTC TCGGCCCGCT GCAGCAGGCT GCGCAGACGG TGTCGGAGCT GGTAGCACGG
CGCGGGTGA
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| Protein sequence | MTTEDIQTKP GDSYVQSFAR GLAVIRAFDA QRPEQTLTEV ASATGLTRAG ARRILLTLQT
LGYVEADGRL FRLTPKILEL GFAYLTSMPF WNLADPVMEQ LSAQIHESCS AAVLDRTEIV
YVLRVPTRKI MTINLSIGSR LPAYCTSMGR VLLSALDDAA LDETLAQSSI RAHTPRTITD
IGELKATIAQ VRQQGWAVVD QELEVGLMSI SAPIRNRRGQ VIAAMNISGN AQRHTAKQMV
KEFLGPLQQA AQTVSELVAR RG
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