| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5243 |
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| Symbol | |
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| ID | 6180703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2448986 |
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| End bp | 2450530 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641684999 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_001811904 |
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| Protein GI | 172064253 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0641076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAATA ACCAGCCTGT CACGCAACGC GAATTCGAAT TTCCCGGCGA CGCGACGCTG
ATGTCGACCA CCGACGCGGA CAGTTACATC AAGTACGCGA ACGCGGCGTT CATCCAGGTC
AGCGGATTTT CTCCCGAAGA GATCGAAGGT CAGCCGCACA ACGTCGTGCG GCATCCGGAC
ATGCCGAAGG AGGCGTTCGC CGACATGTGG GCGACGCTGA AGAACGGCGA ACCGTGGACC
GCACTCGTGA AGAACCGCCG CAAGAACGGC GATCACTACT GGGTGCGCTC GAATACGGTG
CCGGTGATGC GCAACGGGCA GCCGACGGGC TACATGTCGG TGCGCACGAA GGCGTCGCGC
GACGAGATCG CGGCGGCGGA CGCGCTGTAT CGCGCGTTCC GCGAAGGCAA GGCCGGCAAC
CGCCGTTTCC ACAAGGGGCT GATCGTCCGG ACCGGGCTGA TGCGCATTGC GTCACTGTTC
CAGACGATGT CGGTACGGGC GCGGCTGCAT TCGACGCTGT GCGTGCTCGT GCCGGCCGTC
GTCGGCGCGG GCTGGGCCTG CGGGCTGACT GGTGGTGGGC TCGCGGCGTT CGCGGCGGCG
ACGGCCGGCG TGTCGGTTGC CGCCGGGCTG TGGCTCGACG CACAGATCGC ACGGCCGCTG
ATGCAGTTGC GCGATCAGGC GTTGCGCGTC GCGACCGGCG AGAGCCGCAC CGGCGTCGCG
ATGGATCGCG TCGACGAGAT CGGCATGACG CTGCGCACGA TCAACCAGCT CGGATTGATG
TTCCGCTGGC TCGTCGACGA CGTCAGCGAG CAGGTGCACA ACGTGCAGCG CGCGAGCAAC
GAGATCGCGC AAGGCAACAA CGACCTGAGC GCGCGCACCG AGCAGGCGTC CACCAGCGTG
CAGCAGACGG CCGCATCGAT GGCCGAGATG ACGGCCACGG TGTCGAGCAA TGCGGAGACG
GCGCTGCAGG CGAACCAGTT GTCGGTGTCC GCGAGCGACG CGGCCGAGCG CGGCGGGCAG
GCGGTGAGCG AGGTCGTCGC GACGATGAAC GACATCACGG CGAGTTCGCG CAAGATTGCC
GACATCATCG GCGTGATCGA CGGGATCGCG TTCCAGACCA ACATCCTCGC GCTGAACGCG
GCGGTCGAAG CGGCGCGCGC GGGCGATCAG GGCCGCGGTT TCGCGGTGGT CGCCGGCGAG
GTACGGGCGC TCGCGCAGCG CAGCGCGAAC GCGGCGAAGG AAATCAAGAC GCTGATCGGC
GCGAGCGTCG ACCGGGTCGA ATCCGGCGCA CGCATCGTTG ACGGCGCCGG CAAGACGATG
GAGGACATCG TCACGCAGGT GAAGCGCGTG TCGGACCTGA TCGCGGAAAT CAGCTCGTCG
ACGGCCGAGC AGAGCACCGG CGTCGCGCAG GTCGATCAGG CGGTCGTGCA TCTGGACAAC
ATCACGCAGC AGAACGCGGC GCTGGTCGAG CAAAGCACGG CGGCGTCGGA GAGCCTCAAG
CAGCAGGCGA CGCGGCTGGT GGATGCGGTG AACGTGTTTC GGTGA
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| Protein sequence | MRNNQPVTQR EFEFPGDATL MSTTDADSYI KYANAAFIQV SGFSPEEIEG QPHNVVRHPD
MPKEAFADMW ATLKNGEPWT ALVKNRRKNG DHYWVRSNTV PVMRNGQPTG YMSVRTKASR
DEIAAADALY RAFREGKAGN RRFHKGLIVR TGLMRIASLF QTMSVRARLH STLCVLVPAV
VGAGWACGLT GGGLAAFAAA TAGVSVAAGL WLDAQIARPL MQLRDQALRV ATGESRTGVA
MDRVDEIGMT LRTINQLGLM FRWLVDDVSE QVHNVQRASN EIAQGNNDLS ARTEQASTSV
QQTAASMAEM TATVSSNAET ALQANQLSVS ASDAAERGGQ AVSEVVATMN DITASSRKIA
DIIGVIDGIA FQTNILALNA AVEAARAGDQ GRGFAVVAGE VRALAQRSAN AAKEIKTLIG
ASVDRVESGA RIVDGAGKTM EDIVTQVKRV SDLIAEISSS TAEQSTGVAQ VDQAVVHLDN
ITQQNAALVE QSTAASESLK QQATRLVDAV NVFR
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