Gene BamMC406_5237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5237 
Symbol 
ID6180774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2440673 
End bp2441752 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content68% 
IMG OID641684993 
Productpurine nucleoside permease 
Protein accessionYP_001811898 
Protein GI172064247 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG5042] Purine nucleoside permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACTC GCTCCATCCT TTCCGCGGCC GCATTCTCGC TCGCGGCCTG TGCGACCGCG 
CCGTCGATCG CGCAGGACAA CCCCGGCAAC AACGCGGGCA ACGCCGCATT CGCCGAGACC
GGTGCACAGG GCCGCCCGGT CAAGGTCATG ATCATCACGA TGTTCGGTCC GGAGGGCCAG
GCGTGGCTCG ACCGTATCGG CCCGTGGCGC GACATCGCCG TGCCGGGCCT GTCGCCCGAC
TACCCGAACG TCCACTGCAA CAAGCAGGAC GTGTGCGTGG TCACGACCGG CATGGGCTAT
GCGAACGCGT CGGCGACGAT CATGGCGCTC ACGTTCTCGC AGCGCTTCGA CCTGCGCCGC
ACGTATTTCC TGATCTCGGG CATCGCGGGC GTCGACCCCG CACAAGGCAC CGTCGGCTCT
GCCGCATGGT CGAAATACCT GGTGGATTTC AGCCTGCAGT GGGAGCTCGA TGCGCGCGAG
ATTCCGGCCG GCTGGAACAC GGGCTTTCTC GGCATCAACA CGAAGAGTCC GAACGACAAG
CCGCCGCTCG ACTACCGCAC CGAAGTGTTC CAGCTCAACC CGCAGCTGAC CGATGCCGCG
TATGCGCTGT CGCGCAACGT CGTGCTCGCC GACAGCGCGC AGGCTCAGGC CGCGCGCGCG
AAGTTCACGT ATGCGCCGGC GAACCGGCCG CCGACGGTGA TCCAGTGCGA CACGTCATCG
GGCAACACGT GGTTCTCGGG CACGCTGATC GGCGAGCGCG CGCGTCAGTG GACGAAGATC
CTGACCGACG GCAAGGGCAC CTACTGCATG ACCGCGCAGG AAGACAACGC GACGTTTGAA
GCGCTCAAGC GTGCGGCGAG CGTGAAGCGG GTCGACCTGT CGCGCGTCGC GGTGTTGCGC
ACGGGGTCCG ACTTCGACCG GCCGTATGCG GGGCAGACGA GCGCGGACAA CCTGCTGAAC
TACGCGGACC AGGGCGGCTT CGCGCCGGCG ACCGAGAACC TGTACCGCGC GGGCAATCCG
CTCGTCCAGG ACATCGTCAC GCACTGGGGC GAGTGGCGTG ACGGCGTGCC GCGCCGGTAA
 
Protein sequence
MLTRSILSAA AFSLAACATA PSIAQDNPGN NAGNAAFAET GAQGRPVKVM IITMFGPEGQ 
AWLDRIGPWR DIAVPGLSPD YPNVHCNKQD VCVVTTGMGY ANASATIMAL TFSQRFDLRR
TYFLISGIAG VDPAQGTVGS AAWSKYLVDF SLQWELDARE IPAGWNTGFL GINTKSPNDK
PPLDYRTEVF QLNPQLTDAA YALSRNVVLA DSAQAQAARA KFTYAPANRP PTVIQCDTSS
GNTWFSGTLI GERARQWTKI LTDGKGTYCM TAQEDNATFE ALKRAASVKR VDLSRVAVLR
TGSDFDRPYA GQTSADNLLN YADQGGFAPA TENLYRAGNP LVQDIVTHWG EWRDGVPRR