Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5176 |
Symbol | |
ID | 6180107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2366019 |
End bp | 2366927 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641684927 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001811837 |
Protein GI | 172064186 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.55626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.248949 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGAAC GATTCCATCT CGTCGTGATC CGTGAAGTCG AGCGCCAGGG CTCGTTGACC GCAGCCGCCA ACGCGCTGCA CCTCACGCAA TCGGCGCTCA GCCATACCGT CCGGAAGATC GAGCAGCAGC TCGGCACGCC GATCTGGGAT CGGGAGGGCC GCGGCCTGCG GCTGACGCAG GGCGGGCAAT ATCTGCTGAA GCTGGCGAAC CGGCTGCTGC CGCAGTTCGA GCTCGCCGAG GAGCGGATGA AGCAGTATGC AAAGGGCGAG CGCGGCACGC TGCGCATTGG GATGGAATGC CATCCGTGCT ACCAGTGGCT GCTGAAGGTT GTGTCGCCAT ACCTGTCGCG TTGGCCGGAC GTCGACGTGG ACGTGAAGCA GCGCTTCCAG TTCGGCGGCA TCGGCGCGCT GTTCGGCCAT GACATCGACG TACTTGTGAC GCCCGACCCG CTGAACAAGC CGGGGCTGCG CTTCGATCCC GTGTTCGATT ACGAGCAGGT GCTGGTGGTC GCGGATGCGC ACCGGTTCGC GAACGCCGAC TACGTGACGC CCGAGCAGCT GACCGACGAG GTGCTGATCA CCTACCCGGT CGAAAACGAC CGGCTCGACA TCTACAACCA GTTCCTGACG CCGGCCGGCA TCGTGCCGCG GCGCCACAAG TCGATCGAGA CGACCGACAT CATGCTGCAG ATGGTGGCGA GCGGGCGCGG CGTGGCCGCG CTGCCGAGAT GGCTTGCCGA TGAATACGCG GACCGGATGC CGGTCGTGCC GGTCAAGCTC GGCAAGAACG GCATCGCGAA ACAGATCTTT CTCGGCATCC GCGACGCGGA CGCGTCGATC GACTATCTCG CCGCATTCGT CGCGCTGGCG CGCGAATCGA CGTGGAGCGC GCCGCGCATG CTGCGCTAG
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Protein sequence | MLERFHLVVI REVERQGSLT AAANALHLTQ SALSHTVRKI EQQLGTPIWD REGRGLRLTQ GGQYLLKLAN RLLPQFELAE ERMKQYAKGE RGTLRIGMEC HPCYQWLLKV VSPYLSRWPD VDVDVKQRFQ FGGIGALFGH DIDVLVTPDP LNKPGLRFDP VFDYEQVLVV ADAHRFANAD YVTPEQLTDE VLITYPVEND RLDIYNQFLT PAGIVPRRHK SIETTDIMLQ MVASGRGVAA LPRWLADEYA DRMPVVPVKL GKNGIAKQIF LGIRDADASI DYLAAFVALA RESTWSAPRM LR
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