Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5172 |
Symbol | |
ID | 6181079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2360101 |
End bp | 2361012 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641684923 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001811833 |
Protein GI | 172064182 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.106584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGGGA ATCTGTCGAC CCTCGATCTG CGGTTGATCC GCGTGTTTCT CGCGGTCACG GACGCGGGCG GCGTGTCGGC CGCGCAGGCG ATGCTGAACG TCGGCCAGTC GACGATCAGC GCGCAATTGT CGTCGCTCGA GACACGGCTC GGCTACCGGC TCTGCGAGCG CGGCCGCAGC GGCTTCCGGC TCACGCCGAA GGGCGAGCGG TTCCATGCGA TGAGCCGCAA GCTGCTCGCG GCGCTCGACG AATTCGGGAT GGCGGCGCGG CACATGGACC GCCAACTGGT CGGCACGCTG AACATCGGCC TGATCGGCCA TACGCCGATC AGCCAGAACG CGCGTATCGC CGAGGCGATC GCCGCGTTCC GCACGCGCGA CCAGGCCGTG CGCTTCTCGA TCTCGGTGCG CCCGCCGGGC GATCTCGAGG AGAAGCTGCT GAGCGACGAG ATCCAGATTG CCGTCGGCTA TTTCTGGCAT CGCGTGCCGT CGCTGCATTA CACGCCGCTG TTCATCGAGC GGCAGATCGC ATATTGCGGG CGCGGCCATC CGCTATTCGA CGCGGCCGGC GCGCTGACGC CGGCCGACGT CGCGGGATTC GAGTGGGCGT GGCGCTCGTA TCCGCTACCG GAGGCGCAGA TGTCGACGAC GCCCGACCGC GTGACCGCGA CCGCCGACAA CATGGAAGCC GTCGCGCTGC TGATCCTGTC GGGCCATCAC CTCGGTTATC TGCCGCAGCA CTTCGCGGCG CCGTACGTCG CGCAGGGGCT GCTCGCGCCG CTCAATCCCG AGCAGCTGCG CTACGACGTC ACGTTCCATA TGGTCGTCGC GCGCGACGGG CGCGGCAATC CGCTCGTGGA AGCCTTTCTC GAGGATCTCG AGCACGCGCA CCAGGCGCCC GACGCCGTGT GA
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Protein sequence | MLGNLSTLDL RLIRVFLAVT DAGGVSAAQA MLNVGQSTIS AQLSSLETRL GYRLCERGRS GFRLTPKGER FHAMSRKLLA ALDEFGMAAR HMDRQLVGTL NIGLIGHTPI SQNARIAEAI AAFRTRDQAV RFSISVRPPG DLEEKLLSDE IQIAVGYFWH RVPSLHYTPL FIERQIAYCG RGHPLFDAAG ALTPADVAGF EWAWRSYPLP EAQMSTTPDR VTATADNMEA VALLILSGHH LGYLPQHFAA PYVAQGLLAP LNPEQLRYDV TFHMVVARDG RGNPLVEAFL EDLEHAHQAP DAV
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