Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5141 |
Symbol | |
ID | 6180132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2314335 |
End bp | 2315657 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641684893 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001811803 |
Protein GI | 172064152 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0160949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC GCACCCTGCG GCACTGGCCG CGCTCGCTGT TCGCGCGGCT CGCGCTGATC CTGTGCGTGG GCCTCGCGCT CGCGCAGACG CTGTCGTTCT GGCTCACGAT GACGGAGCGC GACCAGGCGA CCACCAACCT GATGATGGGC TACATCGAGC GCGAGGTCGC GAGCTCGGTC GCGCTGCTCG ACCACCTGCC GGCCGCCGAG CGCGCCGCGT GGTTGCCGCG GCTCGCGCGG CGCAGCTACG CGTTCATCCT CGGGCCCGGC GAGACGGGCA CGCCGTCCGA GGCGCGGCTG TCGGCGCGCG TCGAGCGGTC GATCTCGGAC GGCATCGGCG GCGACTACCC GCTGACGGCG AACGCGATTC CCGGCGATCG CGAGCATCTG CAGGTGCATC TGCGCCTGAC CGACGGCTCG CCGTTGACGA TCGACATCCA CCCAATGTCG ACCGTGCCGC TGTCGGGCTG GCTGCCGGTG GTGCTCGCGC TGCAGCTCGC GGTGCTGGCC GCGTGCTGCT GGCTCGCGGT GCGGCTCGCG ACGCGGCCGC TGAACCAGCT CGCGCGGGCG GCCGACGCGC TCGGCCCCGA CCTGAAGGGC GAACGCCTGA ACGAGAGCGG GCCGTCGGAG GTCGCGCGTG CCGCGCGGGC GTTCAACGCG ATGCAGGACC GCATCGCGCA GTACATGGCC GAACGCATGC AGATCCTCGC GTCGATCTCG CACGACCTGC AGACGCCGAT CACGCGCATG CGATTGCGTG TCGACGTGAT GGACGACGAC GCGCAGGGTG CGAAGCTGCG CCAGGACCTG ATCGAGATGG AGCATCTGGT GAAGGAGGGC GTCGCCTATG CGCGCACGCT GCACGGCACG GATGAAGCCG CGCGCCGCAT CGACCTCGAT GCGCTGCTCG ACAGCATCGT CTGCGACTAC ACGGATGCGG GGCAGGACGT CGCGCTGCAC AGCGGCGGCC CGCTCGCGCT CGTCACGCGA CCGAAGGCGC TGCGCCGGAT CGTCGGCAAC CTCGTCGACA ACGCGCTGAA GTTCGCCGGT GCGGCCGAGA TCGACGTGCA GGCGGCGTCG GGCGGCGGCG CGGTCATTGC GGTGCGCGAT CGCGGGCCCG GCATTCCGGA CGATCAGCTC GACGCGGTGT TCGAACCGTT CCGGCGCGTG GAGACGTCAC GCAATCGCGA GACGGGCGGC ACGGGGCTCG GTCTTGCGAT CGCGCGGCAG CTTGCGCTTG CGATGGGCGG CACGCTCACG TTGCGCAACC GGACGGATGG CGGCGGGCTC GAAGCGCGGC TGACGCTGGC GAATGCTGCG TGA
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Protein sequence | MSARTLRHWP RSLFARLALI LCVGLALAQT LSFWLTMTER DQATTNLMMG YIEREVASSV ALLDHLPAAE RAAWLPRLAR RSYAFILGPG ETGTPSEARL SARVERSISD GIGGDYPLTA NAIPGDREHL QVHLRLTDGS PLTIDIHPMS TVPLSGWLPV VLALQLAVLA ACCWLAVRLA TRPLNQLARA ADALGPDLKG ERLNESGPSE VARAARAFNA MQDRIAQYMA ERMQILASIS HDLQTPITRM RLRVDVMDDD AQGAKLRQDL IEMEHLVKEG VAYARTLHGT DEAARRIDLD ALLDSIVCDY TDAGQDVALH SGGPLALVTR PKALRRIVGN LVDNALKFAG AAEIDVQAAS GGGAVIAVRD RGPGIPDDQL DAVFEPFRRV ETSRNRETGG TGLGLAIARQ LALAMGGTLT LRNRTDGGGL EARLTLANAA
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