Gene BamMC406_5140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5140 
Symbol 
ID6179498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2313473 
End bp2314207 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content69% 
IMG OID641684892 
Productmetallophosphoesterase 
Protein accessionYP_001811802 
Protein GI172064151 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.157126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG CCGCGCTGTC CGACATCCAC GGCAACCTCG CCGCGCTCGA CGCGGTGCTC 
GACGACGTTC GCCGCCGCGG CGCCGACCTG ATCGTCAACC TCGGCGACAT CGTGTCGGGT
GCGCTCCATC CGGCCGAAAC TGCCGATCGC CTGATCGCGC TCGACCTGCC GACCATCAAG
GGCAATCACG AACGGCAACT GCTGAGCGGC GATCGCGAAA CGATGGGGCT GTCCGATCGC
TGGGCGCACG ACACGCTGCG CGATGACCAT CGCGCGTGGA TCGCCGCATT GCCCGAACGC
CTGATGCTCG ACGATGACGT GCTGATGGTG CACGGCACGC CCGCCAGCGA CCTCGTCTAT
TTCCTCGAAA CGGTGACGCC CGACGGCTGC CGCGCGGCGA CGCCCGATGA AATCGCACAG
CGCGCGGGCG ACGAGCCGGC GTCGCTGATC CTGTGCGGCC ATACGCATGT CCCGCGGATC
GCGAAGCTCG ACGACGGCCG GCTGATCGTC AATCCGGGTA GCGTCGGGCT GCAGGCGTAC
ACGGACGATC ACCCGCATCC GCACCGGATC GAAACGGGCT CGCCGCATGC GCGCTACGCG
ATGGTGTCGC GCACGCCGGC CGGCTGGCAG GCCGAATTCC ACGCGGTCGA ATATGACTGG
TACACGGCCG CCGACACCGC GGCAGCGCGC GGTCGCGACG ACTGGACCGT CGCGCTGCGC
ACCGGTCGGT GCTGA
 
Protein sequence
MKIAALSDIH GNLAALDAVL DDVRRRGADL IVNLGDIVSG ALHPAETADR LIALDLPTIK 
GNHERQLLSG DRETMGLSDR WAHDTLRDDH RAWIAALPER LMLDDDVLMV HGTPASDLVY
FLETVTPDGC RAATPDEIAQ RAGDEPASLI LCGHTHVPRI AKLDDGRLIV NPGSVGLQAY
TDDHPHPHRI ETGSPHARYA MVSRTPAGWQ AEFHAVEYDW YTAADTAAAR GRDDWTVALR
TGRC