| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5093 |
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| Symbol | |
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| ID | 6181516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2261659 |
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| End bp | 2265060 |
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| Gene Length | 3402 bp |
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| Protein Length | 1133 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641684845 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001811755 |
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| Protein GI | 172064104 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5373] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.161035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTGGG CCTTTGCCGC AATCGGCTTC ATCGCGGGTG GTATCGCCGC ATTATTCGGG
GATTTCTCGG TCGCCAACGG CTCGCTGCTG GGTGCGGTGG CCGGGTTCTG CATCGGCCAC
GCGCTGCGGC AACGCTGGCG CAACGGCGGT GACACGCCGC CCGGCGCGTT CGCGATGTCC
GCACCGCCCG CAACCCCGCA ATCCCCACCC GTTCTGCTCG CCGATCGCGT CGCGCGCCTC
GAAGCGACGG TCGAGACGCT GACGCGCGAA GTCGCGTCGC TGCGCGGCCA GCTCGCCGGC
GCGAAAGCCG GTGCTGCCGC GACGGGCACC GCCACGCACG CGCCGTCGGC CACACCCGCC
ACCGTCCCGC CGCCTGCCCC GCTTCCGCCG CGACCCTCCG TGCGGCCCGC CGTCGCGAGC
GCCGGCACGC CAGCGTCGAC GTCCATGCCG ACTCCCGCAC CGATTCCGGC ACCGGCAGTC
GCCGCGCGGA CGAGCGACGC GCCGGCCGCC GCCGGTGCAC CGACGAATGC ACCCGCAGCC
GCAGCCCGCC CGATCCCGCC CGCTCCGCCC GCGCCCCGCG AACCCGGCAT CGCCGACCGC
GCATTCCGCG CCGCGCGCGA CTGGCTCCTC GGCGGCAACA CGGTCGTGCG CGTCGGGATC
ATCGTGCTGT TCTTCGGCGT CGCGTTCCTG CTCAAGTACG CGGCCGACAA CAGCATGCTG
CCGATCGAAT TCCGTCTCGC CGGCACGGCG CTCGCCGCGG CCGCGCTGCT CGCGGTCGGC
TGGCGCGTGC GTGCGCGCCG CGCCACGTAC GGCCTCGTTC TGCAGGGCGG CGGCATCGGC
ATCCTGTACC TGACGATCTT CGCCGCGACC AAGCTCTACG CGCTGCTGCC CGTCGGCGCC
GCGTTCCCGC TGATGGTCGC GGTGTGCGCG CTGAGCGCGT TCCTCGCGGT GAAGCAGAAC
GCGCTGCCGC TCGCGTTCAT GGGCAGCGCG GGCGGCTTTC TCGCGCCGGT GCTGCTGTCG
ACGGGCCAGG GCAACCATGT CGCGCTGTTC AGCTACTACG CATTACTGAA TGCAGGCATC
TTCGCGATCG CGTGGTTCAA GGCCTGGCGT CCGCTGAACC TGCTCGGCTT CGTGTTCACG
TTCACGATCG GGTCGGCGTG GGGCGTGACG GCCTACCGCC CCGCGCTGTT CGCGAGCACC
GAGCCGTTCC TTATCCTGTT CTTCCTGATG TATGTGGGCA TCGCGTTGCT GTATGCGGTG
AAACGCGAGC TGGCGTTGCG GCACTACGTG GACGGCACGC TCGTGTTCGG CACGCCGATC
GTCGCGACCG CGCTGCAGGC TGCGCTCGTG AAGGACATCC CGTTCGGGCT CGCGTGGAGC
GCCGTCGCGC TGTCGGCGTT CTACGTCGCG CTCGCCGCGT GGCTCGCGCG GCGCCGCGAG
CGCCTCGCGC TGCTGTTCGA ATCCACGCTC GCGCTCGCGG TGATCTTCGC GACGCTCGCG
GTGCCGCTCG CGTTCTCGGG CCCGACGACC AGCGCCGCAT GGGCGATCGA GGGCGCGGCC
GTCGTCTGGC TCGGCGTGCG CGAGAAACGC CTGCTGCGGT TCGGCTTCGG GCTGCTGATG
CAGGTGGCCG CGGCCGGCGC ATTCTTCACG AGCCTGCTCG GGCCGGCCGA CACCACCGCA
CTGCCCGTGC TCAACGGCCC GACCATCGCG ATGCTGCTGA TCGCGCTCGC CGGCCTGTTC
ACCGGCTGGT GGCTGCACGG GCGCGACGAA GCGCGCGCGT GGCACGCATG GATGCCGGAA
GTCGGCGCCG CGGCCGCGGC GTGGGGGCTG CTGTGGTGGG TCGGCGGCGG GCTGCACGAA
ATCCTCGTCT ATGCGAGCCG TCACGTCGAT CTGCATGCGG ACCGCTTCGT CGTCGACGCG
ACCGCGCTGT TCGCGGCCGG CACCGCGTGG CTCGCACACG TCGCGCGCCG CAAGCTCGCG
TGGCCGATCG CCGAATGGCC GGCGCTCGCG CTGACGCCGG TGCTCGCGCT GCTCGCGTGG
CGCGCGTTCG ATTCGCACGA GGCGCCGCTG TCGGGCATGG GCGCGTTCGC GTGGCCGATC
GCCGTCGTCG CGTGCTATGC GCTGCTGCTG CGTCAGTCGC GCGGCACGAC GGCCGCGGAC
GCAGCAGCGG AGACGGAGAG GTCGGCCGTT GCAGCCATCC CCGCCCCCGT GCTCGCGCCG
CTGCACATGC TGATGTTCTG GACGTTGTGC GGGCTGTTCT CGCTCGAAGG CTTCTGGCGC
CTGCGCGCGT ACGTACCCGA AGGCGCATGG AGCTGGAGCG CGTGGGCCTA TGGCTTCGGC
GCGCTGCTCC TGCTGGTGGC GGGCCCCGGC TCGCGCCTGC GCTGGCCGGT TGCCGCATTC
CCGCGTGCGT ACCAGGTATG GGGTGCCGCG CCGCTCGCCG CGCTGCTGGG GTTGTGGAGC
ATCGCCAGCG TGACGAGCGA CGGCGACGCG TCGCCGCTCT TCTGGCTGCC GCTGCTCAAT
CCGCTCGACG TCGCGCAACT GCTGATCTTC GTCGCGTTCG CCACCTGGCT GCGGCGATTG
AAGACGCTCG GCATCACGTG GCATCCGCTT GCGGCCGACC TCGCGGCGCT CGCGACCGTG
TTCCTGTGGT TCAACGCGCT GCTGCTGCGC ACGCTGCATC ACCGTTTCCA CCTGGCCTAC
GACATCGATA CCGTGCTGTC GTCGTTCGGC ATCCAGCAGG TGTTCATGGT CGGCTGGAGC
CTGTTCGCGT TCGCCGGCAT GTGGCTCACG CGCCGTGACG GCATCGCGCG CGTGTGCGCG
CTCGCGTCGC TGCCGCTGAT CGTCGTGATG TGGGTCTGGA CCTTCTATGC GAACTTCACG
CAGGACGGCG GTAGCTGGGC GCGCATCCCG CTGCTCAATC CGCTCGATCT CGTGCTCGTG
GTGGTCTATG CGCTCGCCGC GTCGTGGTTC GTGCGCGCGC GCAAGCTTGG CTGGTCGTTC
GACAACTATC GCGTCGAGCT GCTGAGCGGA GCGGGCGCGA CCGCATTCCT GTGGCTGAAC
GCGATCCTGC TGCGCACCTT GCATCACTGG GCCGGCGTGC CGTACGAATT CGGCGCGATG
GCCGAATCGA CGCTCGTTCA GGCTTCGGTG TCCGTGTACT GGACGCTCTG CGCCCTCGCG
ATCACGATCT GGGCCACGCG CCGCGGGCTG CGTCCGCTGT GGTTCGTCGG CGCCGCGCTG
CTCGCGCTCA CGGTGATCAA GCTGTTCCTG TTCGACCTGT CGCACGTGAC CGGCATCGAG
CGCATCGTGT CGTTCATCGG CATCGGCGTG CTGCTGCTGT TGATCGGCTA TTTCTCGCCG
CTGCCGCCGA AGGCCGCGCT CCAACCGGAC GACGCACGAT GA
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| Protein sequence | MNWAFAAIGF IAGGIAALFG DFSVANGSLL GAVAGFCIGH ALRQRWRNGG DTPPGAFAMS
APPATPQSPP VLLADRVARL EATVETLTRE VASLRGQLAG AKAGAAATGT ATHAPSATPA
TVPPPAPLPP RPSVRPAVAS AGTPASTSMP TPAPIPAPAV AARTSDAPAA AGAPTNAPAA
AARPIPPAPP APREPGIADR AFRAARDWLL GGNTVVRVGI IVLFFGVAFL LKYAADNSML
PIEFRLAGTA LAAAALLAVG WRVRARRATY GLVLQGGGIG ILYLTIFAAT KLYALLPVGA
AFPLMVAVCA LSAFLAVKQN ALPLAFMGSA GGFLAPVLLS TGQGNHVALF SYYALLNAGI
FAIAWFKAWR PLNLLGFVFT FTIGSAWGVT AYRPALFAST EPFLILFFLM YVGIALLYAV
KRELALRHYV DGTLVFGTPI VATALQAALV KDIPFGLAWS AVALSAFYVA LAAWLARRRE
RLALLFESTL ALAVIFATLA VPLAFSGPTT SAAWAIEGAA VVWLGVREKR LLRFGFGLLM
QVAAAGAFFT SLLGPADTTA LPVLNGPTIA MLLIALAGLF TGWWLHGRDE ARAWHAWMPE
VGAAAAAWGL LWWVGGGLHE ILVYASRHVD LHADRFVVDA TALFAAGTAW LAHVARRKLA
WPIAEWPALA LTPVLALLAW RAFDSHEAPL SGMGAFAWPI AVVACYALLL RQSRGTTAAD
AAAETERSAV AAIPAPVLAP LHMLMFWTLC GLFSLEGFWR LRAYVPEGAW SWSAWAYGFG
ALLLLVAGPG SRLRWPVAAF PRAYQVWGAA PLAALLGLWS IASVTSDGDA SPLFWLPLLN
PLDVAQLLIF VAFATWLRRL KTLGITWHPL AADLAALATV FLWFNALLLR TLHHRFHLAY
DIDTVLSSFG IQQVFMVGWS LFAFAGMWLT RRDGIARVCA LASLPLIVVM WVWTFYANFT
QDGGSWARIP LLNPLDLVLV VVYALAASWF VRARKLGWSF DNYRVELLSG AGATAFLWLN
AILLRTLHHW AGVPYEFGAM AESTLVQASV SVYWTLCALA ITIWATRRGL RPLWFVGAAL
LALTVIKLFL FDLSHVTGIE RIVSFIGIGV LLLLIGYFSP LPPKAALQPD DAR
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