Gene BamMC406_5088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5088 
Symbol 
ID6179600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2255562 
End bp2256710 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content70% 
IMG OID641684840 
Productglycosyl hydrolase 
Protein accessionYP_001811750 
Protein GI172064099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC GACTGCTCGT CGCGACCCGC AAGGGCCTGT TCGTGCTGCA AGCCGACGGC 
AACGGCGGCT GGTCGCTCGG CGAGCCGCAC TTCATCGGCG AACCGGTCAG CATGGCGCTG
GCCGATCCGC GCGACGGCAC GCTGTATGCG GCGCTCAACC TGGGCCATTT CGGCGTCAAG
CTGCATCGCC ACCGCACCGG TGCAGCCGAC TGGGAAGAGT GCGCGGTTCC CGTGTATCCA
CCGCAGCCCG CCGACGCGCT GCGCGCCAAC GTCGGCGCAC ATGACGGCGA CGCCGACGCG
GGCGACGAAG CGCCCACCCC GCCTCGGCCG CCCTGGACAC TTCAGCAGAT CTGGTCGCTC
GAAGCCGGCG GCGCCGACGA GCCGGGCGTT CTGTGGGCCG GCACGATACC TGGCGGGCTG
TTCCGCTCCG GCGACGGCGG CGATTCGTGG GCGCTCAACC GCGCATTGTG GGACCGTCCG
GAGCGCCCCG AGTGGTTCGG CGGCGGCTAC GACGCGCCGG GCATTCATTC GGTGATGGTC
GATCCGCGCG ACAGCCGGCA CGTGACGATC GGCATCTCGT GCGGCGGCGT GTGGCAGACG
TTCGACGGCG GCGCGAGCTG GCGCGTGAGC GCCGACGGGA TGGAAGCCGA TTACATGCCG
CCCGAGCGGC GCGGCGAGCC CAACGTGCAG GACCCGCATC GCGTCGTGCA GTGCGCGGCC
AATCCCGATG TGCTGTGGAC CCAGCATCAT TGCGCGATCT TCCGCTCGAC CGACGGCGCC
GCGCACTGGC AGCGCATCGA AGCGCAGCCG TCGAGCTTCG GCTTTGCGGT CGCCGTGCAT
CCGGCGGATC CCGACACCGC GTGGTTCGTA CCGGCAGTGA AGGATGCGTG CCGGATTCCG
GTGAACGGCC GGTTCGTCGT CACGCGCACG CGCGACGGCG GCCGCAGTTT CGAGAGCCTG
TCGAACGGGT TGCCACCTGC GCCGGCCTAC GACCTCGTGT ATCGGCACGG GCTCGCGGTG
GATGACACCG GCACGCGTCT CGCGATGGCG TCGACGACGG GCGGGTTATG GACTTCCGGT
GACGCCGGCG AGAACTGGCG GCAGGTTTCC GCGCATTTGC CGCCGGTGTA TTGCGTGCGT
TTCGGGTAA
 
Protein sequence
MNDRLLVATR KGLFVLQADG NGGWSLGEPH FIGEPVSMAL ADPRDGTLYA ALNLGHFGVK 
LHRHRTGAAD WEECAVPVYP PQPADALRAN VGAHDGDADA GDEAPTPPRP PWTLQQIWSL
EAGGADEPGV LWAGTIPGGL FRSGDGGDSW ALNRALWDRP ERPEWFGGGY DAPGIHSVMV
DPRDSRHVTI GISCGGVWQT FDGGASWRVS ADGMEADYMP PERRGEPNVQ DPHRVVQCAA
NPDVLWTQHH CAIFRSTDGA AHWQRIEAQP SSFGFAVAVH PADPDTAWFV PAVKDACRIP
VNGRFVVTRT RDGGRSFESL SNGLPPAPAY DLVYRHGLAV DDTGTRLAMA STTGGLWTSG
DAGENWRQVS AHLPPVYCVR FG