Gene BamMC406_5084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5084 
Symbol 
ID6181338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2252960 
End bp2253649 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content68% 
IMG OID641684836 
Productaspartyl/asparaginyl beta-hydroxylase 
Protein accessionYP_001811746 
Protein GI172064095 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3555] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTG CCTACGACTA CGCGGCCGGC CTGCTTCGCA CGCTGTACGA CCACCATATC 
GATAGTGGCG CGGTGCTCGA CACGGCCGCG TTCCCCGATG CCGAGCGCTT CATCCACGCG
TGGCCGGCGA TACGCGCGGA AGCGCTCGAC GTCGCGCGCG ACCTGCCGCG CATCCCGCGC
TTTCACGAGA TCATGCGCGA GCAGCACGAC ATCTCGGCCA ACGATGCGCG CGACTGGCGG
ATGTTCATCA TGCAGGCGTA CGGCCAGCCG TTCCCGCGCA ACCTGTCGCG CTGCCCGACC
GTCGAATCGA TCATCGCGGC GTCGCCCGAC GTGCTGTCCG CGTCGCTGTC GTTCCTCGCG
CCGGGCAAGC ACATCCCGCC GCACCGCGGG CCGTTCCGCG GCATCCTGCG CGGCTATCTG
GTGCTGTCGA TGCCGAAGCG CGCGGACGGC ACGCCGGCCG CCGTGCTGAA GGTCGACGGC
CACGAATACC GGCTCGACGA AGGCCGCTTC CTGCTGTGGG ACGACACGTT CGTGCATGAA
GTGTGGAACG ACAGCGACGA AGTCCGGATC GTGCTGCTGC TCGATATCCG CCGGCGCGGC
ATGCCGCGCT TGCTGACGTG GCTGTCGAAT GCGGTGATCG GCATCGTGCG GATCGGGATC
CGCATACGCG GGCGATCGAT TCCGGTCTAG
 
Protein sequence
MSVAYDYAAG LLRTLYDHHI DSGAVLDTAA FPDAERFIHA WPAIRAEALD VARDLPRIPR 
FHEIMREQHD ISANDARDWR MFIMQAYGQP FPRNLSRCPT VESIIAASPD VLSASLSFLA
PGKHIPPHRG PFRGILRGYL VLSMPKRADG TPAAVLKVDG HEYRLDEGRF LLWDDTFVHE
VWNDSDEVRI VLLLDIRRRG MPRLLTWLSN AVIGIVRIGI RIRGRSIPV