| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5078 |
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| Symbol | |
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| ID | 6180301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2247636 |
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| End bp | 2248607 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684830 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001811740 |
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| Protein GI | 172064089 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.321153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTAC TGATCACCGG CGGCGCCGGC TTTCTCGGCC AGCGTCTCGC GCGCAAGCTG
CTCGAGCGCG GCGAGCTGAT CGGCCCCGAC GGCCGGACTG GCAAGATCGA CGAGCTGGTG
CTGCTCGACG TCGTCGAAGG CAGCGATTTC GGCGATGCGC GCGTGACGTC GATCGTCGGC
GACATCGCCG ATCGCGCGGT GCTCGAAAGC GCGATCGATA CGCGCACGGG CGCGATCTTC
CATCTCGCGG CGATCGTCAG CGGGCAGGCC GAAGCCGATT TCGATCTCGG CATGCGGATC
AACCTCGACG CGTCGCGCAC GCTGCTCGAG GTGTGCCGCG CGCGCGGGCA TCGTCCGCGC
GTCGTTTTCA CGAGCTCGGT GGCCGTCTAC GGCGGTGTGC TGCCCGACAT CGTGCAGGAC
GACACCGCGC TGAATCCGCA ATCGTCATAC GGCGCGGAGA AGGCGATCGC CGAGCTGCTG
CTGTGCGACT ATGCGCGGCG CGGCTTCGTC GACGGCCGCG TGCTGCGGCT GCCGACCATC
AGCGTGCGAC CGGGCCGCCC GAATGCGGCC GCGTCGTCGT TCGCGAGCGG CATCATCCGC
GAGCCGCTGA ACGGCGAGGA AAGCGTGTGC CCGGTGCCGG GTTCGACGCG GCTGTGGCTG
CTGTCGCCGC GCGGCGCGAT CGACGCACTC GTCGCCGGTT GCGAAATCGA CAGCGAGAAG
CTCGGCAACA AGCGCGTGAT CAACCTGCCC GGCCTGTCGG TGTCGGTCGA CGAGATGATC
GCGGCGCTGC GCGAAGTCGC GGGCGACGAC GTCGTAAAGC TGATCCGCCA TGTGCCGGAC
GAGCGCGTCG AGAAGATCGT CGGCAGCTGG CCGGGCCGCT GGGACACGAC GCGCGCGGAA
GCGCTCGGGC TGAAGGGTGA CACGTCGTTC GCGGACGTGA TCCGCAGCCA TATCGCCGAC
GAGCGGCGTT GA
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| Protein sequence | MKVLITGGAG FLGQRLARKL LERGELIGPD GRTGKIDELV LLDVVEGSDF GDARVTSIVG
DIADRAVLES AIDTRTGAIF HLAAIVSGQA EADFDLGMRI NLDASRTLLE VCRARGHRPR
VVFTSSVAVY GGVLPDIVQD DTALNPQSSY GAEKAIAELL LCDYARRGFV DGRVLRLPTI
SVRPGRPNAA ASSFASGIIR EPLNGEESVC PVPGSTRLWL LSPRGAIDAL VAGCEIDSEK
LGNKRVINLP GLSVSVDEMI AALREVAGDD VVKLIRHVPD ERVEKIVGSW PGRWDTTRAE
ALGLKGDTSF ADVIRSHIAD ERR
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