Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5073 |
Symbol | |
ID | 6180995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2242459 |
End bp | 2243349 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641684825 |
Product | 3-hydroxyisobutyrate dehydrogenase |
Protein accession | YP_001811735 |
Protein GI | 172064084 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACGAA ATGTTGGAGT CATCGGCCTC GGCGCAATGG GCCTGGGCGT CGCCCGCTCG CTGCTGCGCG CGGGCTTCCG CGTGCACGCA TGCGACGTGC GCGACACCGT GCTGCAGGCG TTCGCGGCCG AAGGCGGCGT GGCCTGCGCG AGCCCGGCCG AACTCGGCGC GCAGTGCGAC GTCGTCGTCA CGCTCGTCGT CAATGCCGCG CAGACTGAAA CGGTGCTGTT CGGCGAGCAC GGCGCGGTCG CGGCGATGAA GCCGGGCGGC GTGGTGATCG CGAGCGCGAC CGTCGCGCCC GACTTCGCGG TTGCGCTCGG CGCGCGCATC GAGGCCGCGG GCCTGCAGAT GCTCGACGCC CCGGTGTCCG GCGGCGCCGC GCGCGCGGCG TCGGGCGAGA TGACGATGAT GACGTCGGGC CCGGCCGCCG CGTATGCGGG TTGCGACGAC GTGCTCGCCG CGATGGCCGC CAAGGTGTAT CGCCTCGGCG ACGCGCACGG CATCGGCTCG AAGGTGAAGA TCATCAACCA GCTGCTGGCC GGCGTGCATA TCGCGGCGGC CGCCGAGGCG ATGGCGCTCG GCTTGCGCGA AGGCGTCGAC GCCGACGCGC TGTACGACGT GATCACGCAC AGCGCCGGCA ATTCGTGGAT GTTCGAGAAC CGCGTGCCGC ACATCCTGAA CGGCGACTAC ACGCCGCTGT CGGCCGTCGA CATCTTCGTG AAGGATCTCG GCCTCGTGCT CGATACCGCG CGCCGCAGCA AGTTCCCGCT GCCGCTGTCG GCCACCGCGC ACCAGATGTT CATGAGCGCG TCGAGCGCCG GCCACGGCGG CGAGGACGAT TCCGCCGTGA TCAAGACTTT CCCCGGCATC ACGCTGCCGC CCGCCCGCTG A
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Protein sequence | MSRNVGVIGL GAMGLGVARS LLRAGFRVHA CDVRDTVLQA FAAEGGVACA SPAELGAQCD VVVTLVVNAA QTETVLFGEH GAVAAMKPGG VVIASATVAP DFAVALGARI EAAGLQMLDA PVSGGAARAA SGEMTMMTSG PAAAYAGCDD VLAAMAAKVY RLGDAHGIGS KVKIINQLLA GVHIAAAAEA MALGLREGVD ADALYDVITH SAGNSWMFEN RVPHILNGDY TPLSAVDIFV KDLGLVLDTA RRSKFPLPLS ATAHQMFMSA SSAGHGGEDD SAVIKTFPGI TLPPAR
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