Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5071 |
Symbol | |
ID | 6180993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2240406 |
End bp | 2241479 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684823 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001811733 |
Protein GI | 172064082 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.509382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACCCG ACGTACCCGC TTCCCCCCTC GCCGAACCGG CGCCGCAGCG CATCCGCTTC GGCATCGTGC TGCTGCCGAA CTTCACGCTC ACGGCCTTCT CGGGTTTCGT CGACATGCTG CGGCTGTCGG CCGACGACGG CGACTACAGC AAGCCCGTGC GCTGCGCGTG GAGCGTGATC GGCGAAACGC TGGCGCCGGT GCGCGCGAGC TGCGGGATCC AGATCACGCC GTGGGAAACC TTCGATGGGG CCGAACCATT CGACTACGTG GTCGTGGTCG GCGGGCTGCT GCACTCCGGG CCGCAAGCCG GCCCCGAAAC GCTCGAGTTC ATCCGCCGCG CGGCGACGGC CGGCGCGACG GTCGTCGGGA TCTGCACGGG CGTGTTTACG CTGATGCGCG CGAAGGTGCT CGACGGCTAT CGCACCTGCG TGAGCTGGTT CCACTACTGG GATTTCATCG AACGCTTCCC GAGCGCCGAT CCCGACCTGC TGATCGCCGA CCGCCTGTTC GTGATCGACC AGCGCCGCAT CACCTGCTCG GGCGGCCGCG CGTCGATCGA CGTCGCCGCC GCGATCCTGC TGCGTCATTT CGACCACGCG ACCGTGCAGA AGGCGCTGCG CATCCTGCTC GTCGGCGAGA TGCAGAAAGG CAATGCGCCG CAGCCGCATC CGCCGGGCCT CGAGCCGGCC ACGCACCCGA AGGTCAAGCG CGCGATTCTT CTGATGGAAC AGCATGTCGG GCGCTCGCTG CCGCTCGAGG AACTCGCGTG CAAGCTCGAC ATGTCGACGC GCCAGCTCGA GCGTCTATTT AAGGCCGAGA CGGGCAGGAG TCCGCAGGCG TTCGCGAAGC AGGTGCGGCT GCGCACGGCC GCGTGGCTGC TGACCAGTTC CGACCGCACC GTCGCCGATA TCGCGTCGAG CTGCGGGTTC GCCGATGCGT CGCACCTCGG CCGGGAGTTC CGCAAGCAGT TCGGCGTGCC GCCGGCCACC TATCGCGAGC GCGGCGGAGA AGTCGCGGAA GTCGCGGTGC CGGTTGCAAC AGATGCCGAT CCCGTCGAAG ACATCGCCGA CTGA
|
Protein sequence | MTPDVPASPL AEPAPQRIRF GIVLLPNFTL TAFSGFVDML RLSADDGDYS KPVRCAWSVI GETLAPVRAS CGIQITPWET FDGAEPFDYV VVVGGLLHSG PQAGPETLEF IRRAATAGAT VVGICTGVFT LMRAKVLDGY RTCVSWFHYW DFIERFPSAD PDLLIADRLF VIDQRRITCS GGRASIDVAA AILLRHFDHA TVQKALRILL VGEMQKGNAP QPHPPGLEPA THPKVKRAIL LMEQHVGRSL PLEELACKLD MSTRQLERLF KAETGRSPQA FAKQVRLRTA AWLLTSSDRT VADIASSCGF ADASHLGREF RKQFGVPPAT YRERGGEVAE VAVPVATDAD PVEDIAD
|
| |