Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5015 |
Symbol | |
ID | 6181276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2174387 |
End bp | 2175628 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641684767 |
Product | Rieske (2Fe-2S) domain-containing protein |
Protein accession | YP_001811677 |
Protein GI | 172064026 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.277088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.658452 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAT CGGCAGACAT TCGTGCACTG ATCGCGCGAC GCAAGGAAGG CCACAGCCTC GAGGCGCCGT TCTATACGAG CGAGGAAATC TTCGGCCTCG ACATGGAGGC GATTTTCCGC CAGCACTGGA TCCAGGTAGC GGTCGAACCG GACATTCCGG AGCCGGGCGA CTACGTGACC GTGGAACTGG GCAGCGACTC GATCCTGATC GTGCGCGACG ACGACATGGA AATTCGCGCG TTCCACAACG TGTGCCGTCA CCGCGGCGCG CGTCTGTGCA ACGAAGACAA GGGTTCGGTC GGCAACATCG TGTGCCCGTA CCACAGCTGG ACCTACAACC TGACCGGCCA GCTGATGTTC GCCGAGCACA TGGGCGAGAA GTTCGACCGC TGCAAGCACA GCCTGAAGTC GGTGCACGTG CAGAACCTCG CGGGGCTGAT CTTCGTCTGC CTCGCCGAGG AGCCGCCGGT CGATTTCGCG CAGCTGCGCG CCGAGATGGA GCCGTACCTG CTGCCGCACG ATCTGCCGAA CACGAAGATC GCCGCCCAGG TCGACATCAT CGAGGAAGGC AACTGGAAGC TCACGATGGA GAACAACCGC GAGTGCTATC ACTGCGTCGC GAACCATCCG GAGCTGACGA TCTCGCTGTA CGAATACGGC TTCGGCTACC AGCGCTCCGA CGCGAACGCC GAAGGCATGG ACGCGTTCGC CGAAACCTGC GTGCGCCGCG GCAAGGAGTG GGCCGAGATG GGCCTGCCGT CCGCCGAAAT CGAAAAGCTG AGCGACGTGA CGGGCTTCCG CACGCAGCGC CTGCCGCTCG ACCGCCACGG CGAATCGCAG ACGCTCGACG CGAAGGTCGC ATCGAAGAAG CTGCTCGGCA AGTTCGAGCA GGCCGACCTC GGCGGCCTGT CGTTCTGGAC GCAGCCGAAC TCGTGGCACC ACTTCATGAG CGATCACATC GTGACGTTCT CGGTGATTCC GCTGTCGGCC GGCAAGACGC TCGTGCGCAC CAAGTGGCTC GTGCACAAGG ATGCGAAGGA AGGCATCGAC TACGATGTGA AGAACCTGAC GGCCGTGTGG AACGCGACCA ACGACCAGGA TCGCGCGCTC GTCGAATTCT CGCAGCGTGG CGCGACCAGC AGCGCATACG AGCCGGGCCC GTATTCGCCG TTCACGGAAG GTCTCGTCGA AAAATTCTCG GCCTGGTACA TCGGCCGGCT CGCCGAAAAA ACCGGCGCGT AG
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Protein sequence | MKVSADIRAL IARRKEGHSL EAPFYTSEEI FGLDMEAIFR QHWIQVAVEP DIPEPGDYVT VELGSDSILI VRDDDMEIRA FHNVCRHRGA RLCNEDKGSV GNIVCPYHSW TYNLTGQLMF AEHMGEKFDR CKHSLKSVHV QNLAGLIFVC LAEEPPVDFA QLRAEMEPYL LPHDLPNTKI AAQVDIIEEG NWKLTMENNR ECYHCVANHP ELTISLYEYG FGYQRSDANA EGMDAFAETC VRRGKEWAEM GLPSAEIEKL SDVTGFRTQR LPLDRHGESQ TLDAKVASKK LLGKFEQADL GGLSFWTQPN SWHHFMSDHI VTFSVIPLSA GKTLVRTKWL VHKDAKEGID YDVKNLTAVW NATNDQDRAL VEFSQRGATS SAYEPGPYSP FTEGLVEKFS AWYIGRLAEK TGA
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