Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4964 |
Symbol | |
ID | 6181340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2115834 |
End bp | 2116724 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641684716 |
Product | amidohydrolase 2 |
Protein accession | YP_001811626 |
Protein GI | 172063975 |
COG category | [R] General function prediction only |
COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.088857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCAG TGCGTATCGA TTCCCATCAG CACTTCTGGC GTTACCGCGC GGCCGACTAT CCGTGGATCG GCCCTGGCAT GGGCGTGCTC GCCCGCGATT ACCTGCCCGA CGCGCTGTGG CCGCAGATGC ATGCGCAGGC GCTCGGCGCG TCGATCGCGG TGCAGGCGCG CGCCGGACGC GACGAGACGG CGTTCCTGCT CGATCTCGCC CGCGACGACG CGCGCATCGC GGCGGTGGTC GGCTGGGAGG ATCTCGGTGC GCCGGCGCTC GCCGAGCGCG TGGCCGAATG GCGCAGCCCG AAGCTGCGCG GCTTTCGTCA CCAGGTGCAG GACGAAGCCG ACGTTGGCGC GTTCGTCGCG GATCCCGCGT TCAATCGCGG CGTCGCGTGG CTGCAGGCGA ACGGTTACGT GTACGACGTG CTCGTGTACG AACGCCAGTT GCCCGACGTG CGCGCATTCT GCGCACGGCA CGACGCGCAC TGGCTCGTGC TCGATCATGC GGGCAAGCCC GCGCTCGCCG AGTTCGACCG CGACGGCACC GCGCTCGCAC GCTGGCGTGC CGCATTGCGC GAGCTGAGCG CGCTGCCGCA TGTCGTGTGC AAGCTGTCGG GGCTCGTGAC CGAGACAGAC TGGCGGCGCG GCCTGCGCGG GCAGGACATC CGGCACATCG AGCAATGCCT CGATGCGGCG CTCGACGCAT TCGGCCCGCA GCGGTTGATG TTCGGCTCGG ACTGGCCCGT GTGCCTGCTC GCGGCGTCGT ATGACGAAGT GACGTCGCTG GTGGAGCGCT GGGCCGAAGC GCGGTTGTCG GCGGCCGAGC GCAACGCGTT GTGGGGCGGC ACGGCCGCAC GTTGCTATGC GGTGCCGGGC GACCCGAAGC GCGGCATATA A
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Protein sequence | MGAVRIDSHQ HFWRYRAADY PWIGPGMGVL ARDYLPDALW PQMHAQALGA SIAVQARAGR DETAFLLDLA RDDARIAAVV GWEDLGAPAL AERVAEWRSP KLRGFRHQVQ DEADVGAFVA DPAFNRGVAW LQANGYVYDV LVYERQLPDV RAFCARHDAH WLVLDHAGKP ALAEFDRDGT ALARWRAALR ELSALPHVVC KLSGLVTETD WRRGLRGQDI RHIEQCLDAA LDAFGPQRLM FGSDWPVCLL AASYDEVTSL VERWAEARLS AAERNALWGG TAARCYAVPG DPKRGI
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