| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4947 |
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| Symbol | |
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| ID | 6179905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2092992 |
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| End bp | 2094110 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641684700 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001811610 |
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| Protein GI | 172063959 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGT CCCGTCTTAC GTCCATTTCC GCCGCCGCCG TGCTGTTCGC CGCCGGCGCC
GCCGCCGCGC AAGCGGAAAC CGTGAAGATC GCCATCGCTG GTCCGATGAG CGGTTCGGTC
GCCCAATACG GCGACATGGT GAAGGCCGGC GCGCTGACCG CGATCGAACA GATCAACGCG
GCAGGCGGTG CGGGCGGCAA CAAGTTTGAA GTGGTGATGA TGGACGACGC TTGCGAACCG
AAGCAGGCCG TCGCCGTCGC CAACAAGATC GTCAGCCAGA AGATCAAGTA CGTGATCGGC
CACGTGTGCT CGGGTTCGAC GATCCCCGCA TCCGACATCT ACGAAAACGA AGGCATCGTG
ATGGTCACGC CGTCGGCCAC CGCGCCGCAG CTGACGGAAG GCAAGAAGCG CCACTTCATC
TTCCGCACGA TCGGCCGTGA CGACCAGCAA GGCCCGGCCG CCGCGCATTA CATCATCAAC
AACGTGAAAC CGAAGAAGGT CGCGATCCTG CACGACAAGC AGTCGTACGG CCAGGGCATC
GCGTCGTCGG TGAAGAAGGA CCTCGAAGGC GCGAAGATTC CGGTGGTCCT GTTCGAAGGC
GTCAACGCCG GCGATTCGGA CTACTCGGCG ATCATCACGA AGCTGAAGTC GCAAGGCGTC
GACTTCGTCT ACTTCGGCGG CTATCACCCG GAAATGGGCC TGCTGATGCG TCAGGCGCGC
GAGCAGGGCG TGAAGGCAAC GTTCATGGGG CCTGAAGGTG TGGGCAACAA GGACGTGACG
GCGATCGCCG GCCCGGCGTC GGAAGGCATG CTGGTCACGC TGCCGGCCGA CTTCTCGGCC
GACCCGGCCA ACGCAGGCCT CGTGAAGGCG TTCGCGGACA AGAAGCGCGA CGCGAACGGC
CCGTTCCAGA TGCCGTCGTA CGCAGCGGTG AAGATCATCG CCGACTCGAT CGCGGGAGCG
AAGACGACGG ACCCGACGAA GGTCGCCGCG TACATGCACA AGACGACGTT CGACACGCCG
ATCGGCAAGG TCGCGTATGA CGCACAGGGC GACCTGAAGT CGTTCAAGTT CGTCGTCTAC
ACGTGGCACA AGGACGCGAC GAAGACCGCC GCCCGGTAA
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| Protein sequence | MTLSRLTSIS AAAVLFAAGA AAAQAETVKI AIAGPMSGSV AQYGDMVKAG ALTAIEQINA
AGGAGGNKFE VVMMDDACEP KQAVAVANKI VSQKIKYVIG HVCSGSTIPA SDIYENEGIV
MVTPSATAPQ LTEGKKRHFI FRTIGRDDQQ GPAAAHYIIN NVKPKKVAIL HDKQSYGQGI
ASSVKKDLEG AKIPVVLFEG VNAGDSDYSA IITKLKSQGV DFVYFGGYHP EMGLLMRQAR
EQGVKATFMG PEGVGNKDVT AIAGPASEGM LVTLPADFSA DPANAGLVKA FADKKRDANG
PFQMPSYAAV KIIADSIAGA KTTDPTKVAA YMHKTTFDTP IGKVAYDAQG DLKSFKFVVY
TWHKDATKTA AR
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