Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4907 |
Symbol | |
ID | 6180891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2056490 |
End bp | 2057263 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641684659 |
Product | band 7 protein |
Protein accession | YP_001811570 |
Protein GI | 172063919 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.551483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.286339 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGTT ATACGTTCGG CTTCAGCAGC GTCCTGATCG TCTTCGTCGT GGTGCTCGTC GCGTCGTCGA TCCGCATCTT CCGCGAGTAC GAGCGCGGCG TCGTGTTCAT GCTCGGCCGG TTCTGGAAAG TGAAGGGGCC GGGGCTCGTG CTGATCATCC CGATCGTCCA GCAGGTCGTG CGGATCGACC TGCGCACCGT CGTGTTCGAC GTGCCGCCGC AGGACGTGAT CACGCGCGAC AACGTGTCGG TGAAGGTCAA TGCGGTCGTG TATTTCCGCG TGGTCGATCC GGAAAAGGCC GTGATCCAGG TCGCGCGCTT CTTCGACGCG ACCAGCCAGC TCTCGCAGAC GACGCTGCGT TCGGTGCTCG GCAAGCACGA GCTCGACGCG CTGCTCGCCG AGCGCGAGCA GCTGAACGCC GACATCCAGA AGACGCTCGA CGCGCAGACC GATGCGTGGG GGATCAAGGT ATCGACGGTC GAGATCAAGC ACGTCGACCT GAACGAGACG ATGGTGCGCG CGATCGCGCG GCAGGCCGAG GCCGAGCGCG AGCGGCGCGC GAAGGTGATT CATGCGGAAG GCGAACTGCA GGCGTCGGAG AAGCTGCTGC AGGCCGCGCA GCGGCTCGCG CTGCAGCCGC AGGCGATGCA GTTGCGTTAC CTGCAGACGC TGACGACGAT CGCGGCCGAC AAGAATTCGA CGATCGTGTT TCCGCTGCCG ATCGATCTGC TGGGGTCGCT GCTGGATCGG TTGGGGGTGA AGCGGGAGCC TTGA
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Protein sequence | MIGYTFGFSS VLIVFVVVLV ASSIRIFREY ERGVVFMLGR FWKVKGPGLV LIIPIVQQVV RIDLRTVVFD VPPQDVITRD NVSVKVNAVV YFRVVDPEKA VIQVARFFDA TSQLSQTTLR SVLGKHELDA LLAEREQLNA DIQKTLDAQT DAWGIKVSTV EIKHVDLNET MVRAIARQAE AERERRAKVI HAEGELQASE KLLQAAQRLA LQPQAMQLRY LQTLTTIAAD KNSTIVFPLP IDLLGSLLDR LGVKREP
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